Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SgcaP82350 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SgcaP82350 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SgcaP82350 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SgcaP82350 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SgcaP82350 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SgcaP82350 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
SgcaP82350 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SgcaP82350 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC14.55□□□□□ -0.08
SgcaP82350 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
SgcaP82350 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
SgcaP82350 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SgcaP82350 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
SgcaP82350 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SgcaP82350 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SgcaP82350 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SgcaP82350 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SgcaP82350 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SgcaP82350 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SgcaP82350 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC14.54□□□□□ -0.08
SgcaP82350 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SgcaP82350 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
SgcaP82350 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SgcaP82350 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SgcaP82350 Gm14281-201ENSMUST00000121700 1294 ntBASIC14.54□□□□□ -0.08
SgcaP82350 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SgcaP82350 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SgcaP82350 Gm21956-201ENSMUST00000179946 522 ntBASIC14.54□□□□□ -0.08
SgcaP82350 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
SgcaP82350 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SgcaP82350 Gm37563-201ENSMUST00000192580 1513 ntBASIC14.54□□□□□ -0.08
SgcaP82350 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SgcaP82350 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
SgcaP82350 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SgcaP82350 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SgcaP82350 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
SgcaP82350 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SgcaP82350 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SgcaP82350 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
SgcaP82350 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SgcaP82350 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
SgcaP82350 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SgcaP82350 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SgcaP82350 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SgcaP82350 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SgcaP82350 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SgcaP82350 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SgcaP82350 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
SgcaP82350 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
SgcaP82350 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC14.53□□□□□ -0.08
SgcaP82350 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SgcaP82350 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SgcaP82350 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SgcaP82350 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SgcaP82350 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
SgcaP82350 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SgcaP82350 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
SgcaP82350 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SgcaP82350 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SgcaP82350 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SgcaP82350 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC14.53□□□□□ -0.08
SgcaP82350 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SgcaP82350 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SgcaP82350 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SgcaP82350 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
SgcaP82350 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.08
SgcaP82350 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC14.52□□□□□ -0.08
SgcaP82350 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SgcaP82350 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SgcaP82350 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SgcaP82350 Gm12821-201ENSMUST00000120022 600 ntBASIC14.52□□□□□ -0.09
SgcaP82350 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
SgcaP82350 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
SgcaP82350 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC14.52□□□□□ -0.09
SgcaP82350 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SgcaP82350 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SgcaP82350 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SgcaP82350 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
SgcaP82350 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
SgcaP82350 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SgcaP82350 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SgcaP82350 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
SgcaP82350 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SgcaP82350 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
SgcaP82350 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SgcaP82350 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SgcaP82350 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SgcaP82350 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SgcaP82350 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
SgcaP82350 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SgcaP82350 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
SgcaP82350 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SgcaP82350 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SgcaP82350 Gm26833-201ENSMUST00000180899 440 ntBASIC14.51□□□□□ -0.09
SgcaP82350 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC14.51□□□□□ -0.09
SgcaP82350 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SgcaP82350 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
SgcaP82350 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
SgcaP82350 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
SgcaP82350 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms