Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Ldb1P70662 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ldb1P70662 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.27■□□□□ 0.36
Ldb1P70662 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ldb1P70662 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
Ldb1P70662 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Ldb1P70662 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ldb1P70662 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ldb1P70662 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ldb1P70662 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Ldb1P70662 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ldb1P70662 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ldb1P70662 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Ldb1P70662 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ldb1P70662 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ldb1P70662 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.26■□□□□ 0.35
Ldb1P70662 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Ldb1P70662 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.26■□□□□ 0.35
Ldb1P70662 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ldb1P70662 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Ldb1P70662 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ldb1P70662 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ldb1P70662 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.26■□□□□ 0.35
Ldb1P70662 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ldb1P70662 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ldb1P70662 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ldb1P70662 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.25■□□□□ 0.35
Ldb1P70662 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ldb1P70662 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ldb1P70662 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ldb1P70662 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.25■□□□□ 0.35
Ldb1P70662 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ldb1P70662 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ldb1P70662 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Ldb1P70662 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ldb1P70662 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ldb1P70662 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ldb1P70662 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ldb1P70662 Gm13168-201ENSMUST00000121771 632 ntBASIC17.25■□□□□ 0.35
Ldb1P70662 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.25■□□□□ 0.35
Ldb1P70662 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ldb1P70662 Gm20760-201ENSMUST00000179197 648 ntBASIC17.25■□□□□ 0.35
Ldb1P70662 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Ldb1P70662 Gm27011-201ENSMUST00000182352 972 ntBASIC17.25■□□□□ 0.35
Ldb1P70662 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ldb1P70662 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ldb1P70662 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ldb1P70662 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ldb1P70662 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ldb1P70662 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ldb1P70662 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ldb1P70662 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ldb1P70662 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ldb1P70662 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ldb1P70662 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Ldb1P70662 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ldb1P70662 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ldb1P70662 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Ldb1P70662 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ldb1P70662 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ldb1P70662 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ldb1P70662 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.24■□□□□ 0.35
Ldb1P70662 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ldb1P70662 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ldb1P70662 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ldb1P70662 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ldb1P70662 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ldb1P70662 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Ldb1P70662 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.23■□□□□ 0.35
Ldb1P70662 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ldb1P70662 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ldb1P70662 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Ldb1P70662 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ldb1P70662 Gm10517-202ENSMUST00000192970 758 ntBASIC17.23■□□□□ 0.35
Ldb1P70662 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ldb1P70662 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.23■□□□□ 0.35
Ldb1P70662 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Ldb1P70662 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ldb1P70662 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Ldb1P70662 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ldb1P70662 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ldb1P70662 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ldb1P70662 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ldb1P70662 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ldb1P70662 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ldb1P70662 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ldb1P70662 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Ldb1P70662 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Ldb1P70662 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
Ldb1P70662 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.22■□□□□ 0.35
Ldb1P70662 Gm15378-201ENSMUST00000121894 207 ntBASIC17.22■□□□□ 0.35
Ldb1P70662 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ldb1P70662 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ldb1P70662 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ldb1P70662 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ldb1P70662 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ldb1P70662 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ldb1P70662 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ldb1P70662 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ldb1P70662 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms