Protein–RNA interactions for Protein: P70658

Cxcr4, C-X-C chemokine receptor type 4, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr4P70658 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cxcr4P70658 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cxcr4P70658 Gm10812-201ENSMUST00000099864 546 ntBASIC16.26■□□□□ 0.19
Cxcr4P70658 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cxcr4P70658 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cxcr4P70658 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Cxcr4P70658 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cxcr4P70658 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cxcr4P70658 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cxcr4P70658 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cxcr4P70658 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cxcr4P70658 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Cxcr4P70658 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cxcr4P70658 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.25■□□□□ 0.19
Cxcr4P70658 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cxcr4P70658 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Cxcr4P70658 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cxcr4P70658 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cxcr4P70658 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cxcr4P70658 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cxcr4P70658 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cxcr4P70658 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cxcr4P70658 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.25■□□□□ 0.19
Cxcr4P70658 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC16.25■□□□□ 0.19
Cxcr4P70658 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cxcr4P70658 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cxcr4P70658 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cxcr4P70658 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.25■□□□□ 0.19
Cxcr4P70658 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cxcr4P70658 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Cxcr4P70658 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cxcr4P70658 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Cxcr4P70658 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cxcr4P70658 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Cxcr4P70658 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cxcr4P70658 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Cxcr4P70658 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cxcr4P70658 Gm5643-201ENSMUST00000117081 966 ntBASIC16.24■□□□□ 0.19
Cxcr4P70658 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.24■□□□□ 0.19
Cxcr4P70658 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC16.24■□□□□ 0.19
Cxcr4P70658 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.24■□□□□ 0.19
Cxcr4P70658 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cxcr4P70658 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cxcr4P70658 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Cxcr4P70658 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cxcr4P70658 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.24■□□□□ 0.19
Cxcr4P70658 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cxcr4P70658 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cxcr4P70658 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cxcr4P70658 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cxcr4P70658 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cxcr4P70658 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cxcr4P70658 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cxcr4P70658 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cxcr4P70658 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cxcr4P70658 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cxcr4P70658 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Cxcr4P70658 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.23■□□□□ 0.19
Cxcr4P70658 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cxcr4P70658 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cxcr4P70658 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC16.23■□□□□ 0.19
Cxcr4P70658 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cxcr4P70658 Gm13158-201ENSMUST00000122007 736 ntBASIC16.23■□□□□ 0.19
Cxcr4P70658 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC16.23■□□□□ 0.19
Cxcr4P70658 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cxcr4P70658 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cxcr4P70658 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Cxcr4P70658 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cxcr4P70658 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cxcr4P70658 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cxcr4P70658 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cxcr4P70658 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cxcr4P70658 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cxcr4P70658 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cxcr4P70658 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cxcr4P70658 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.23■□□□□ 0.19
Cxcr4P70658 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cxcr4P70658 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cxcr4P70658 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cxcr4P70658 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cxcr4P70658 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cxcr4P70658 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cxcr4P70658 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cxcr4P70658 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cxcr4P70658 Gm11927-201ENSMUST00000118472 759 ntBASIC16.22■□□□□ 0.19
Cxcr4P70658 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.22■□□□□ 0.19
Cxcr4P70658 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Cxcr4P70658 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cxcr4P70658 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cxcr4P70658 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cxcr4P70658 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cxcr4P70658 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cxcr4P70658 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cxcr4P70658 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cxcr4P70658 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cxcr4P70658 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cxcr4P70658 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cxcr4P70658 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cxcr4P70658 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cxcr4P70658 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms