Protein–RNA interactions for Protein: P70398

Usp9x, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, mousemouse

Known RBP Predictions only

Length 2,559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp9xP70398 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Usp9xP70398 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Usp9xP70398 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Usp9xP70398 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Usp9xP70398 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC14.33□□□□□ -0.11
Usp9xP70398 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp9xP70398 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp9xP70398 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp9xP70398 AC154855.1-201ENSMUST00000227353 1458 ntBASIC14.33□□□□□ -0.12
Usp9xP70398 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp9xP70398 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC14.33□□□□□ -0.12
Usp9xP70398 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Usp9xP70398 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
Usp9xP70398 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp9xP70398 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp9xP70398 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp9xP70398 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC14.33□□□□□ -0.12
Usp9xP70398 Gm4995-201ENSMUST00000117247 432 ntBASIC14.32□□□□□ -0.12
Usp9xP70398 Gm11336-201ENSMUST00000118168 334 ntBASIC14.32□□□□□ -0.12
Usp9xP70398 Gm6376-201ENSMUST00000209407 580 ntBASIC14.32□□□□□ -0.12
Usp9xP70398 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp9xP70398 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp9xP70398 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp9xP70398 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Usp9xP70398 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp9xP70398 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Usp9xP70398 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Usp9xP70398 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Usp9xP70398 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp9xP70398 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp9xP70398 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Usp9xP70398 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.32□□□□□ -0.12
Usp9xP70398 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp9xP70398 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Usp9xP70398 AC122351.1-201ENSMUST00000220467 126 ntBASIC14.32□□□□□ -0.12
Usp9xP70398 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp9xP70398 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp9xP70398 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Usp9xP70398 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Usp9xP70398 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp9xP70398 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp9xP70398 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp9xP70398 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp9xP70398 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC14.32□□□□□ -0.12
Usp9xP70398 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp9xP70398 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp9xP70398 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Usp9xP70398 Gm7862-201ENSMUST00000121461 292 ntBASIC14.31□□□□□ -0.12
Usp9xP70398 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.31□□□□□ -0.12
Usp9xP70398 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.31□□□□□ -0.12
Usp9xP70398 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp9xP70398 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp9xP70398 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp9xP70398 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC14.31□□□□□ -0.12
Usp9xP70398 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp9xP70398 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Usp9xP70398 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp9xP70398 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp9xP70398 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp9xP70398 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Usp9xP70398 Gm1818-201ENSMUST00000169406 1184 ntBASIC14.31□□□□□ -0.12
Usp9xP70398 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Usp9xP70398 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Usp9xP70398 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp9xP70398 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp9xP70398 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Usp9xP70398 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp9xP70398 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp9xP70398 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp9xP70398 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.31□□□□□ -0.12
Usp9xP70398 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp9xP70398 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.3□□□□□ -0.12
Usp9xP70398 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp9xP70398 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC14.3□□□□□ -0.12
Usp9xP70398 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp9xP70398 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp9xP70398 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Usp9xP70398 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp9xP70398 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp9xP70398 Gm32996-201ENSMUST00000199828 1447 ntBASIC14.3□□□□□ -0.12
Usp9xP70398 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC14.3□□□□□ -0.12
Usp9xP70398 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Usp9xP70398 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Usp9xP70398 Gm2213-201ENSMUST00000197485 688 ntBASIC14.3□□□□□ -0.12
Usp9xP70398 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Usp9xP70398 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp9xP70398 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp9xP70398 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp9xP70398 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp9xP70398 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Usp9xP70398 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp9xP70398 Gm42922-201ENSMUST00000195887 2078 ntBASIC14.3□□□□□ -0.12
Usp9xP70398 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp9xP70398 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Usp9xP70398 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp9xP70398 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp9xP70398 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp9xP70398 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp9xP70398 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp9xP70398 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms