Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.17■□□□□ 0.34
Shox2P70390 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Shox2P70390 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shox2P70390 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC17.17■□□□□ 0.34
Shox2P70390 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Shox2P70390 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shox2P70390 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shox2P70390 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shox2P70390 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shox2P70390 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shox2P70390 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.17■□□□□ 0.34
Shox2P70390 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shox2P70390 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC17.17■□□□□ 0.34
Shox2P70390 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Shox2P70390 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.17■□□□□ 0.34
Shox2P70390 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.17■□□□□ 0.34
Shox2P70390 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Shox2P70390 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shox2P70390 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Shox2P70390 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Shox2P70390 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.16■□□□□ 0.34
Shox2P70390 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shox2P70390 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shox2P70390 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shox2P70390 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Shox2P70390 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shox2P70390 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC17.16■□□□□ 0.34
Shox2P70390 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shox2P70390 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC17.16■□□□□ 0.34
Shox2P70390 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Shox2P70390 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shox2P70390 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Shox2P70390 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shox2P70390 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shox2P70390 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Shox2P70390 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
Shox2P70390 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shox2P70390 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shox2P70390 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Shox2P70390 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shox2P70390 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shox2P70390 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Shox2P70390 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC17.15■□□□□ 0.34
Shox2P70390 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shox2P70390 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shox2P70390 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.15■□□□□ 0.34
Shox2P70390 Gm15546-201ENSMUST00000122095 826 ntBASIC17.15■□□□□ 0.34
Shox2P70390 Wdr70-203ENSMUST00000227371 1130 ntBASIC17.15■□□□□ 0.34
Shox2P70390 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shox2P70390 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shox2P70390 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Shox2P70390 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.15■□□□□ 0.34
Shox2P70390 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shox2P70390 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Shox2P70390 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shox2P70390 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shox2P70390 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shox2P70390 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Shox2P70390 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Shox2P70390 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Shox2P70390 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.14■□□□□ 0.33
Shox2P70390 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Shox2P70390 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Shox2P70390 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Shox2P70390 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Shox2P70390 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Shox2P70390 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Shox2P70390 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Shox2P70390 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Shox2P70390 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Shox2P70390 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Shox2P70390 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Shox2P70390 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Shox2P70390 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Shox2P70390 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.14■□□□□ 0.33
Shox2P70390 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Shox2P70390 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shox2P70390 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Shox2P70390 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shox2P70390 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Shox2P70390 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shox2P70390 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shox2P70390 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shox2P70390 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.13■□□□□ 0.33
Shox2P70390 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shox2P70390 Gm43060-201ENSMUST00000200621 289 ntBASIC17.13■□□□□ 0.33
Shox2P70390 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.13■□□□□ 0.33
Shox2P70390 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shox2P70390 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shox2P70390 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shox2P70390 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shox2P70390 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shox2P70390 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shox2P70390 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.12■□□□□ 0.33
Shox2P70390 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Shox2P70390 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.12■□□□□ 0.33
Shox2P70390 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shox2P70390 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.12■□□□□ 0.33
Shox2P70390 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC17.12■□□□□ 0.33
Shox2P70390 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms