Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim4P70271 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim4P70271 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim4P70271 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Pdlim4P70271 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim4P70271 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim4P70271 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim4P70271 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim4P70271 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim4P70271 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim4P70271 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim4P70271 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim4P70271 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim4P70271 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim4P70271 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim4P70271 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim4P70271 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim4P70271 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC14.39□□□□□ -0.11
Pdlim4P70271 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim4P70271 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC14.39□□□□□ -0.11
Pdlim4P70271 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Pdlim4P70271 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim4P70271 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim4P70271 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim4P70271 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim4P70271 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim4P70271 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim4P70271 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim4P70271 Gm45412-201ENSMUST00000210217 2275 ntBASIC14.39□□□□□ -0.11
Pdlim4P70271 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim4P70271 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdlim4P70271 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pdlim4P70271 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pdlim4P70271 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pdlim4P70271 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pdlim4P70271 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pdlim4P70271 CT010444.2-201ENSMUST00000217877 1629 ntBASIC14.38□□□□□ -0.11
Pdlim4P70271 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pdlim4P70271 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pdlim4P70271 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pdlim4P70271 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pdlim4P70271 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pdlim4P70271 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pdlim4P70271 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC14.38□□□□□ -0.11
Pdlim4P70271 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pdlim4P70271 Gm6576-201ENSMUST00000169678 883 ntBASIC14.38□□□□□ -0.11
Pdlim4P70271 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pdlim4P70271 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC14.38□□□□□ -0.11
Pdlim4P70271 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pdlim4P70271 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pdlim4P70271 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Pdlim4P70271 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pdlim4P70271 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pdlim4P70271 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pdlim4P70271 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pdlim4P70271 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pdlim4P70271 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pdlim4P70271 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pdlim4P70271 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pdlim4P70271 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pdlim4P70271 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pdlim4P70271 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pdlim4P70271 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pdlim4P70271 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pdlim4P70271 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pdlim4P70271 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Pdlim4P70271 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pdlim4P70271 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC14.37□□□□□ -0.11
Pdlim4P70271 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pdlim4P70271 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pdlim4P70271 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pdlim4P70271 Cxcl14-202ENSMUST00000224801 1467 ntBASIC14.37□□□□□ -0.11
Pdlim4P70271 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pdlim4P70271 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdlim4P70271 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdlim4P70271 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC14.36□□□□□ -0.11
Pdlim4P70271 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdlim4P70271 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Pdlim4P70271 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdlim4P70271 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdlim4P70271 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC14.36□□□□□ -0.11
Pdlim4P70271 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdlim4P70271 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdlim4P70271 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC14.36□□□□□ -0.11
Pdlim4P70271 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdlim4P70271 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdlim4P70271 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC14.36□□□□□ -0.11
Pdlim4P70271 AC153881.1-201ENSMUST00000214448 284 ntBASIC14.36□□□□□ -0.11
Pdlim4P70271 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdlim4P70271 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Pdlim4P70271 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Pdlim4P70271 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdlim4P70271 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdlim4P70271 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pdlim4P70271 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Pdlim4P70271 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdlim4P70271 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdlim4P70271 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pdlim4P70271 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pdlim4P70271 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms