Protein–RNA interactions for Protein: P68433

Hist1h3a, Histone H3.1, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h3aP68433 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC15.1■□□□□ 0.01
Hist1h3aP68433 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Hist1h3aP68433 AC124581.1-201ENSMUST00000225416 1399 ntBASIC15.1■□□□□ 0.01
Hist1h3aP68433 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Hist1h3aP68433 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Hist1h3aP68433 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hist1h3aP68433 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Hist1h3aP68433 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hist1h3aP68433 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Hist1h3aP68433 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hist1h3aP68433 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hist1h3aP68433 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hist1h3aP68433 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
Hist1h3aP68433 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hist1h3aP68433 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hist1h3aP68433 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hist1h3aP68433 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hist1h3aP68433 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Hist1h3aP68433 Gm10517-202ENSMUST00000192970 758 ntBASIC15.09■□□□□ 0.01
Hist1h3aP68433 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC15.09■□□□□ 0.01
Hist1h3aP68433 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hist1h3aP68433 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Hist1h3aP68433 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
Hist1h3aP68433 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hist1h3aP68433 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hist1h3aP68433 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hist1h3aP68433 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Hist1h3aP68433 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hist1h3aP68433 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Hist1h3aP68433 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Hist1h3aP68433 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Hist1h3aP68433 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Hist1h3aP68433 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Hist1h3aP68433 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Hist1h3aP68433 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC15.08■□□□□ 0.01
Hist1h3aP68433 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hist1h3aP68433 CT010444.2-201ENSMUST00000217877 1629 ntBASIC15.08■□□□□ 0
Hist1h3aP68433 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC15.08■□□□□ 0
Hist1h3aP68433 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC15.08■□□□□ 0
Hist1h3aP68433 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC15.08■□□□□ 0
Hist1h3aP68433 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Hist1h3aP68433 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hist1h3aP68433 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Hist1h3aP68433 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hist1h3aP68433 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hist1h3aP68433 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC15.08■□□□□ 0
Hist1h3aP68433 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC15.08■□□□□ 0
Hist1h3aP68433 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC15.08■□□□□ 0
Hist1h3aP68433 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hist1h3aP68433 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Hist1h3aP68433 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hist1h3aP68433 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hist1h3aP68433 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC15.07■□□□□ 0
Hist1h3aP68433 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Hist1h3aP68433 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC15.07■□□□□ 0
Hist1h3aP68433 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
Hist1h3aP68433 Gm24841-201ENSMUST00000158676 357 ntBASIC15.07■□□□□ 0
Hist1h3aP68433 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hist1h3aP68433 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Hist1h3aP68433 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Hist1h3aP68433 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Hist1h3aP68433 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hist1h3aP68433 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC15.07■□□□□ 0
Hist1h3aP68433 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Hist1h3aP68433 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hist1h3aP68433 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15.06■□□□□ 0
Hist1h3aP68433 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC15.06■□□□□ 0
Hist1h3aP68433 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hist1h3aP68433 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Hist1h3aP68433 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hist1h3aP68433 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Hist1h3aP68433 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC15.06■□□□□ 0
Hist1h3aP68433 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Hist1h3aP68433 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hist1h3aP68433 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC15.06■□□□□ 0
Hist1h3aP68433 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC15.06■□□□□ 0
Hist1h3aP68433 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC15.06■□□□□ 0
Hist1h3aP68433 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC15.06■□□□□ 0
Hist1h3aP68433 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC15.06■□□□□ 0
Hist1h3aP68433 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Hist1h3aP68433 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Hist1h3aP68433 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hist1h3aP68433 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hist1h3aP68433 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hist1h3aP68433 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hist1h3aP68433 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15.05■□□□□ 0
Hist1h3aP68433 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Hist1h3aP68433 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Hist1h3aP68433 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Hist1h3aP68433 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
Hist1h3aP68433 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC15.05■□□□□ -0
Hist1h3aP68433 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC15.05■□□□□ -0
Hist1h3aP68433 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC15.05■□□□□ -0
Hist1h3aP68433 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Hist1h3aP68433 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Hist1h3aP68433 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Hist1h3aP68433 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Hist1h3aP68433 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC15.05■□□□□ -0
Hist1h3aP68433 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15.05■□□□□ -0
Hist1h3aP68433 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms