Protein–RNA interactions for Protein: P68404

Prkcb, Protein kinase C beta type, mousemouse

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkcbP68404 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PrkcbP68404 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PrkcbP68404 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
PrkcbP68404 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.73■□□□□ 0.59
PrkcbP68404 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PrkcbP68404 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PrkcbP68404 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PrkcbP68404 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PrkcbP68404 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.73■□□□□ 0.59
PrkcbP68404 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.73■□□□□ 0.59
PrkcbP68404 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.73■□□□□ 0.59
PrkcbP68404 Gm45058-201ENSMUST00000205810 766 ntBASIC18.73■□□□□ 0.59
PrkcbP68404 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PrkcbP68404 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
PrkcbP68404 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PrkcbP68404 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PrkcbP68404 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PrkcbP68404 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PrkcbP68404 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PrkcbP68404 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PrkcbP68404 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PrkcbP68404 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
PrkcbP68404 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PrkcbP68404 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PrkcbP68404 Mir5130-201ENSMUST00000175160 84 ntBASIC18.72■□□□□ 0.59
PrkcbP68404 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PrkcbP68404 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
PrkcbP68404 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
PrkcbP68404 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PrkcbP68404 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PrkcbP68404 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PrkcbP68404 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
PrkcbP68404 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PrkcbP68404 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PrkcbP68404 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PrkcbP68404 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.72■□□□□ 0.59
PrkcbP68404 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
PrkcbP68404 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.72■□□□□ 0.59
PrkcbP68404 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
PrkcbP68404 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PrkcbP68404 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PrkcbP68404 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PrkcbP68404 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.71■□□□□ 0.59
PrkcbP68404 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PrkcbP68404 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PrkcbP68404 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.71■□□□□ 0.59
PrkcbP68404 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
PrkcbP68404 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.71■□□□□ 0.59
PrkcbP68404 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PrkcbP68404 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.71■□□□□ 0.59
PrkcbP68404 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PrkcbP68404 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PrkcbP68404 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PrkcbP68404 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.71■□□□□ 0.59
PrkcbP68404 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.71■□□□□ 0.59
PrkcbP68404 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PrkcbP68404 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PrkcbP68404 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
PrkcbP68404 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PrkcbP68404 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PrkcbP68404 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.71■□□□□ 0.58
PrkcbP68404 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PrkcbP68404 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PrkcbP68404 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PrkcbP68404 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
PrkcbP68404 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PrkcbP68404 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
PrkcbP68404 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
PrkcbP68404 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
PrkcbP68404 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PrkcbP68404 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PrkcbP68404 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PrkcbP68404 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
PrkcbP68404 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
PrkcbP68404 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PrkcbP68404 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PrkcbP68404 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PrkcbP68404 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PrkcbP68404 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
PrkcbP68404 Gm16061-201ENSMUST00000122167 857 ntBASIC18.69■□□□□ 0.58
PrkcbP68404 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.69■□□□□ 0.58
PrkcbP68404 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18.69■□□□□ 0.58
PrkcbP68404 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PrkcbP68404 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PrkcbP68404 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PrkcbP68404 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.69■□□□□ 0.58
PrkcbP68404 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PrkcbP68404 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
PrkcbP68404 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
PrkcbP68404 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
PrkcbP68404 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PrkcbP68404 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PrkcbP68404 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PrkcbP68404 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PrkcbP68404 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PrkcbP68404 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
PrkcbP68404 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PrkcbP68404 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
PrkcbP68404 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PrkcbP68404 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms