Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ybx1P62960 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ybx1P62960 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.75■□□□□ 0.43
Ybx1P62960 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ybx1P62960 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ybx1P62960 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ybx1P62960 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Ybx1P62960 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ybx1P62960 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
Ybx1P62960 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ybx1P62960 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ybx1P62960 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.74■□□□□ 0.43
Ybx1P62960 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ybx1P62960 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ybx1P62960 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ybx1P62960 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ybx1P62960 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ybx1P62960 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ybx1P62960 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ybx1P62960 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
Ybx1P62960 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.73■□□□□ 0.43
Ybx1P62960 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ybx1P62960 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ybx1P62960 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC17.73■□□□□ 0.43
Ybx1P62960 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.73■□□□□ 0.43
Ybx1P62960 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.73■□□□□ 0.43
Ybx1P62960 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Ybx1P62960 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Ybx1P62960 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ybx1P62960 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ybx1P62960 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Ybx1P62960 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ybx1P62960 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Ybx1P62960 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ybx1P62960 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ybx1P62960 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ybx1P62960 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ybx1P62960 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
Ybx1P62960 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ybx1P62960 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC17.72■□□□□ 0.43
Ybx1P62960 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ybx1P62960 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC17.72■□□□□ 0.43
Ybx1P62960 Gm17807-201ENSMUST00000186869 298 ntBASIC17.72■□□□□ 0.43
Ybx1P62960 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Ybx1P62960 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Ybx1P62960 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ybx1P62960 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ybx1P62960 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ybx1P62960 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ybx1P62960 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Ybx1P62960 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ybx1P62960 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ybx1P62960 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Ybx1P62960 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Ybx1P62960 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ybx1P62960 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ybx1P62960 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ybx1P62960 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ybx1P62960 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC17.71■□□□□ 0.43
Ybx1P62960 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.71■□□□□ 0.43
Ybx1P62960 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ybx1P62960 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ybx1P62960 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ybx1P62960 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.71■□□□□ 0.43
Ybx1P62960 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ybx1P62960 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ybx1P62960 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ybx1P62960 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ybx1P62960 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
Ybx1P62960 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ybx1P62960 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ybx1P62960 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ybx1P62960 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Ybx1P62960 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ybx1P62960 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ybx1P62960 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ybx1P62960 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Ybx1P62960 Gm11355-201ENSMUST00000121120 306 ntBASIC17.7■□□□□ 0.42
Ybx1P62960 Gm26039-201ENSMUST00000158152 144 ntBASIC17.7■□□□□ 0.42
Ybx1P62960 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
Ybx1P62960 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Ybx1P62960 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ybx1P62960 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ybx1P62960 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.7■□□□□ 0.42
Ybx1P62960 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Ybx1P62960 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ybx1P62960 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Ybx1P62960 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ybx1P62960 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Ybx1P62960 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ybx1P62960 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ybx1P62960 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ybx1P62960 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ybx1P62960 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC17.69■□□□□ 0.42
Ybx1P62960 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ybx1P62960 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Ybx1P62960 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Ybx1P62960 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Ybx1P62960 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ybx1P62960 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms