Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lsm6P62313 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lsm6P62313 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Lsm6P62313 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Lsm6P62313 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lsm6P62313 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Lsm6P62313 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lsm6P62313 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lsm6P62313 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC15.18■□□□□ 0.02
Lsm6P62313 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Lsm6P62313 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Lsm6P62313 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Lsm6P62313 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC15.18■□□□□ 0.02
Lsm6P62313 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC15.18■□□□□ 0.02
Lsm6P62313 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lsm6P62313 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC15.18■□□□□ 0.02
Lsm6P62313 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Lsm6P62313 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Lsm6P62313 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC15.18■□□□□ 0.02
Lsm6P62313 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Lsm6P62313 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC15.18■□□□□ 0.02
Lsm6P62313 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Lsm6P62313 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Lsm6P62313 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Lsm6P62313 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm6P62313 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm6P62313 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm6P62313 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm6P62313 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm6P62313 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm6P62313 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm6P62313 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm6P62313 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm6P62313 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm6P62313 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm6P62313 Gm10517-202ENSMUST00000192970 758 ntBASIC15.17■□□□□ 0.02
Lsm6P62313 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC15.17■□□□□ 0.02
Lsm6P62313 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm6P62313 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm6P62313 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm6P62313 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm6P62313 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm6P62313 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm6P62313 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm6P62313 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm6P62313 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm6P62313 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
Lsm6P62313 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm6P62313 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm6P62313 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm6P62313 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm6P62313 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Lsm6P62313 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm6P62313 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm6P62313 Gm12669-201ENSMUST00000122162 1009 ntBASIC15.16■□□□□ 0.02
Lsm6P62313 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm6P62313 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm6P62313 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm6P62313 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC15.16■□□□□ 0.02
Lsm6P62313 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm6P62313 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm6P62313 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
Lsm6P62313 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
Lsm6P62313 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm6P62313 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsm6P62313 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsm6P62313 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsm6P62313 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsm6P62313 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsm6P62313 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsm6P62313 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsm6P62313 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC15.15■□□□□ 0.02
Lsm6P62313 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Lsm6P62313 Gm10653-202ENSMUST00000139570 835 ntBASIC15.15■□□□□ 0.02
Lsm6P62313 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsm6P62313 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Lsm6P62313 Gm10698-201ENSMUST00000182663 604 ntBASIC15.15■□□□□ 0.02
Lsm6P62313 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Lsm6P62313 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC15.15■□□□□ 0.02
Lsm6P62313 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Lsm6P62313 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Lsm6P62313 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Lsm6P62313 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsm6P62313 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Lsm6P62313 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsm6P62313 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsm6P62313 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsm6P62313 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Lsm6P62313 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC15.15■□□□□ 0.02
Lsm6P62313 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsm6P62313 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Lsm6P62313 CT010444.2-201ENSMUST00000217877 1629 ntBASIC15.14■□□□□ 0.01
Lsm6P62313 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lsm6P62313 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Lsm6P62313 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Lsm6P62313 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Lsm6P62313 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC15.14■□□□□ 0.01
Lsm6P62313 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lsm6P62313 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Lsm6P62313 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms