Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sec61a1P61620 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.27■□□□□ 0.03
Sec61a1P61620 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sec61a1P61620 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.27■□□□□ 0.03
Sec61a1P61620 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Sec61a1P61620 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sec61a1P61620 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Sec61a1P61620 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Sec61a1P61620 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
Sec61a1P61620 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sec61a1P61620 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.03
Sec61a1P61620 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sec61a1P61620 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sec61a1P61620 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sec61a1P61620 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sec61a1P61620 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sec61a1P61620 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sec61a1P61620 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sec61a1P61620 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.26■□□□□ 0.03
Sec61a1P61620 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sec61a1P61620 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sec61a1P61620 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sec61a1P61620 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Sec61a1P61620 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Sec61a1P61620 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Sec61a1P61620 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Sec61a1P61620 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC15.26■□□□□ 0.03
Sec61a1P61620 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sec61a1P61620 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sec61a1P61620 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Sec61a1P61620 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sec61a1P61620 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC15.26■□□□□ 0.03
Sec61a1P61620 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sec61a1P61620 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sec61a1P61620 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sec61a1P61620 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sec61a1P61620 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sec61a1P61620 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sec61a1P61620 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sec61a1P61620 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sec61a1P61620 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Sec61a1P61620 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sec61a1P61620 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sec61a1P61620 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC15.25■□□□□ 0.03
Sec61a1P61620 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC15.25■□□□□ 0.03
Sec61a1P61620 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sec61a1P61620 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC15.25■□□□□ 0.03
Sec61a1P61620 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sec61a1P61620 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sec61a1P61620 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sec61a1P61620 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sec61a1P61620 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC15.25■□□□□ 0.03
Sec61a1P61620 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sec61a1P61620 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sec61a1P61620 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Sec61a1P61620 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sec61a1P61620 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sec61a1P61620 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Sec61a1P61620 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sec61a1P61620 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
Sec61a1P61620 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Sec61a1P61620 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sec61a1P61620 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Sec61a1P61620 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Sec61a1P61620 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sec61a1P61620 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sec61a1P61620 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sec61a1P61620 Gm37805-201ENSMUST00000192612 1094 ntBASIC15.24■□□□□ 0.03
Sec61a1P61620 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC15.24■□□□□ 0.03
Sec61a1P61620 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sec61a1P61620 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sec61a1P61620 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC15.24■□□□□ 0.03
Sec61a1P61620 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC15.24■□□□□ 0.03
Sec61a1P61620 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sec61a1P61620 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sec61a1P61620 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sec61a1P61620 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Sec61a1P61620 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sec61a1P61620 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sec61a1P61620 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sec61a1P61620 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sec61a1P61620 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sec61a1P61620 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sec61a1P61620 Gm37856-201ENSMUST00000191634 999 ntBASIC15.23■□□□□ 0.03
Sec61a1P61620 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Sec61a1P61620 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Sec61a1P61620 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sec61a1P61620 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sec61a1P61620 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sec61a1P61620 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sec61a1P61620 Hivep3-201ENSMUST00000084306 2973 ntBASIC15.23■□□□□ 0.03
Sec61a1P61620 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Sec61a1P61620 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sec61a1P61620 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sec61a1P61620 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sec61a1P61620 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sec61a1P61620 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sec61a1P61620 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sec61a1P61620 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Sec61a1P61620 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms