Protein–RNA interactions for Protein: P58873

Rhbdl3, Rhomboid-related protein 3, mousemouse

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhbdl3P58873 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rhbdl3P58873 Gm27000-201ENSMUST00000182943 842 ntBASIC20.57■□□□□ 0.88
Rhbdl3P58873 Gm27741-201ENSMUST00000185060 237 ntBASIC20.57■□□□□ 0.88
Rhbdl3P58873 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Rhbdl3P58873 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rhbdl3P58873 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rhbdl3P58873 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rhbdl3P58873 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Rhbdl3P58873 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rhbdl3P58873 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rhbdl3P58873 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC20.57■□□□□ 0.88
Rhbdl3P58873 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rhbdl3P58873 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rhbdl3P58873 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rhbdl3P58873 Mir770-201ENSMUST00000103252 94 ntBASIC20.56■□□□□ 0.88
Rhbdl3P58873 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
Rhbdl3P58873 AC130713.1-201ENSMUST00000228853 1096 ntBASIC20.56■□□□□ 0.88
Rhbdl3P58873 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rhbdl3P58873 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rhbdl3P58873 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rhbdl3P58873 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rhbdl3P58873 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rhbdl3P58873 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rhbdl3P58873 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rhbdl3P58873 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Rhbdl3P58873 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rhbdl3P58873 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rhbdl3P58873 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
Rhbdl3P58873 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Rhbdl3P58873 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC20.55■□□□□ 0.88
Rhbdl3P58873 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Rhbdl3P58873 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rhbdl3P58873 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Rhbdl3P58873 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rhbdl3P58873 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rhbdl3P58873 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rhbdl3P58873 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC20.54■□□□□ 0.88
Rhbdl3P58873 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC20.54■□□□□ 0.88
Rhbdl3P58873 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC20.54■□□□□ 0.88
Rhbdl3P58873 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rhbdl3P58873 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Rhbdl3P58873 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rhbdl3P58873 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rhbdl3P58873 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rhbdl3P58873 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rhbdl3P58873 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Rhbdl3P58873 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rhbdl3P58873 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
Rhbdl3P58873 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rhbdl3P58873 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Rhbdl3P58873 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rhbdl3P58873 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rhbdl3P58873 Gm28033-201ENSMUST00000184224 96 ntBASIC20.53■□□□□ 0.88
Rhbdl3P58873 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC20.53■□□□□ 0.88
Rhbdl3P58873 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rhbdl3P58873 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rhbdl3P58873 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rhbdl3P58873 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rhbdl3P58873 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rhbdl3P58873 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rhbdl3P58873 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rhbdl3P58873 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rhbdl3P58873 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rhbdl3P58873 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rhbdl3P58873 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rhbdl3P58873 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rhbdl3P58873 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rhbdl3P58873 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Rhbdl3P58873 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC20.52■□□□□ 0.88
Rhbdl3P58873 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rhbdl3P58873 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rhbdl3P58873 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rhbdl3P58873 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rhbdl3P58873 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rhbdl3P58873 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Rhbdl3P58873 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Rhbdl3P58873 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rhbdl3P58873 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rhbdl3P58873 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rhbdl3P58873 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Rhbdl3P58873 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC20.51■□□□□ 0.87
Rhbdl3P58873 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rhbdl3P58873 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC20.51■□□□□ 0.87
Rhbdl3P58873 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC20.51■□□□□ 0.87
Rhbdl3P58873 AC159205.3-201ENSMUST00000224614 874 ntBASIC20.51■□□□□ 0.87
Rhbdl3P58873 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rhbdl3P58873 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rhbdl3P58873 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rhbdl3P58873 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rhbdl3P58873 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rhbdl3P58873 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.5■□□□□ 0.87
Rhbdl3P58873 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rhbdl3P58873 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC20.5■□□□□ 0.87
Rhbdl3P58873 Gm6623-201ENSMUST00000173570 544 ntBASIC20.5■□□□□ 0.87
Rhbdl3P58873 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rhbdl3P58873 Gm17807-201ENSMUST00000186869 298 ntBASIC20.5■□□□□ 0.87
Rhbdl3P58873 Gm17971-201ENSMUST00000190239 806 ntBASIC20.5■□□□□ 0.87
Rhbdl3P58873 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC20.5■□□□□ 0.87
Rhbdl3P58873 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rhbdl3P58873 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms