Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
SmoP56726 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SmoP56726 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SmoP56726 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.41■□□□□ 0.38
SmoP56726 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SmoP56726 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SmoP56726 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SmoP56726 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SmoP56726 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SmoP56726 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SmoP56726 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.41■□□□□ 0.38
SmoP56726 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
SmoP56726 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
SmoP56726 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.4■□□□□ 0.38
SmoP56726 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.4■□□□□ 0.38
SmoP56726 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SmoP56726 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SmoP56726 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SmoP56726 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SmoP56726 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SmoP56726 Mir5130-201ENSMUST00000175160 84 ntBASIC17.4■□□□□ 0.38
SmoP56726 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.4■□□□□ 0.38
SmoP56726 Gm7977-201ENSMUST00000193787 748 ntBASIC17.4■□□□□ 0.38
SmoP56726 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SmoP56726 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.4■□□□□ 0.38
SmoP56726 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
SmoP56726 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.4■□□□□ 0.38
SmoP56726 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SmoP56726 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SmoP56726 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SmoP56726 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SmoP56726 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
SmoP56726 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
SmoP56726 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SmoP56726 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
SmoP56726 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.4■□□□□ 0.38
SmoP56726 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SmoP56726 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.4■□□□□ 0.38
SmoP56726 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SmoP56726 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
SmoP56726 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SmoP56726 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SmoP56726 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SmoP56726 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SmoP56726 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SmoP56726 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.39■□□□□ 0.37
SmoP56726 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.39■□□□□ 0.37
SmoP56726 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SmoP56726 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
SmoP56726 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SmoP56726 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
SmoP56726 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
SmoP56726 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SmoP56726 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.39■□□□□ 0.37
SmoP56726 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.39■□□□□ 0.37
SmoP56726 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
SmoP56726 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SmoP56726 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SmoP56726 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SmoP56726 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SmoP56726 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
SmoP56726 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
SmoP56726 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.38■□□□□ 0.37
SmoP56726 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SmoP56726 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.38■□□□□ 0.37
SmoP56726 Gm16061-201ENSMUST00000122167 857 ntBASIC17.38■□□□□ 0.37
SmoP56726 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SmoP56726 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.38■□□□□ 0.37
SmoP56726 Gm7370-201ENSMUST00000219471 767 ntBASIC17.38■□□□□ 0.37
SmoP56726 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SmoP56726 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SmoP56726 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SmoP56726 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.38■□□□□ 0.37
SmoP56726 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SmoP56726 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.38■□□□□ 0.37
SmoP56726 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SmoP56726 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SmoP56726 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SmoP56726 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SmoP56726 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SmoP56726 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SmoP56726 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.37■□□□□ 0.37
SmoP56726 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
SmoP56726 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SmoP56726 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
SmoP56726 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.37■□□□□ 0.37
SmoP56726 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
SmoP56726 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
SmoP56726 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.37■□□□□ 0.37
SmoP56726 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SmoP56726 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
SmoP56726 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
SmoP56726 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.37■□□□□ 0.37
SmoP56726 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SmoP56726 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SmoP56726 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SmoP56726 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SmoP56726 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SmoP56726 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SmoP56726 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms