Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Lim2P56563 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.33■□□□□ 0.36
Lim2P56563 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Lim2P56563 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lim2P56563 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lim2P56563 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lim2P56563 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Lim2P56563 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Lim2P56563 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.32■□□□□ 0.36
Lim2P56563 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.32■□□□□ 0.36
Lim2P56563 Gm21814-202ENSMUST00000203277 873 ntBASIC17.32■□□□□ 0.36
Lim2P56563 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.32■□□□□ 0.36
Lim2P56563 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Lim2P56563 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lim2P56563 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Lim2P56563 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lim2P56563 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lim2P56563 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lim2P56563 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lim2P56563 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Lim2P56563 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.32■□□□□ 0.36
Lim2P56563 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lim2P56563 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lim2P56563 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lim2P56563 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lim2P56563 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Lim2P56563 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.31■□□□□ 0.36
Lim2P56563 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lim2P56563 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Lim2P56563 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lim2P56563 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.31■□□□□ 0.36
Lim2P56563 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.31■□□□□ 0.36
Lim2P56563 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lim2P56563 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lim2P56563 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.31■□□□□ 0.36
Lim2P56563 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Lim2P56563 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lim2P56563 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Lim2P56563 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Lim2P56563 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lim2P56563 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Lim2P56563 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lim2P56563 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lim2P56563 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lim2P56563 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lim2P56563 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lim2P56563 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lim2P56563 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Lim2P56563 Gm12085-201ENSMUST00000119263 940 ntBASIC17.3■□□□□ 0.36
Lim2P56563 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Lim2P56563 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.3■□□□□ 0.36
Lim2P56563 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lim2P56563 Odf3b-204ENSMUST00000227834 930 ntBASIC17.3■□□□□ 0.36
Lim2P56563 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lim2P56563 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lim2P56563 Gm5417-201ENSMUST00000079706 384 ntBASIC17.3■□□□□ 0.36
Lim2P56563 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lim2P56563 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Lim2P56563 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.3■□□□□ 0.36
Lim2P56563 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lim2P56563 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lim2P56563 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Lim2P56563 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Lim2P56563 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Lim2P56563 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Lim2P56563 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lim2P56563 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Lim2P56563 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.29■□□□□ 0.36
Lim2P56563 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lim2P56563 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lim2P56563 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lim2P56563 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Lim2P56563 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Lim2P56563 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.29■□□□□ 0.36
Lim2P56563 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Lim2P56563 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.29■□□□□ 0.36
Lim2P56563 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lim2P56563 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Lim2P56563 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Lim2P56563 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Lim2P56563 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lim2P56563 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lim2P56563 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lim2P56563 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Lim2P56563 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lim2P56563 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lim2P56563 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lim2P56563 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Lim2P56563 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lim2P56563 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Lim2P56563 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lim2P56563 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lim2P56563 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.28■□□□□ 0.36
Lim2P56563 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lim2P56563 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Lim2P56563 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Lim2P56563 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lim2P56563 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Lim2P56563 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lim2P56563 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms