Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.16■□□□□ 0.34
Atxn1P54254 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Atxn1P54254 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.16■□□□□ 0.34
Atxn1P54254 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Atxn1P54254 Gm13474-201ENSMUST00000122466 815 ntBASIC17.16■□□□□ 0.34
Atxn1P54254 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Atxn1P54254 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Atxn1P54254 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Atxn1P54254 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Atxn1P54254 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Atxn1P54254 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.16■□□□□ 0.34
Atxn1P54254 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Atxn1P54254 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Atxn1P54254 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Atxn1P54254 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Atxn1P54254 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Atxn1P54254 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.15■□□□□ 0.34
Atxn1P54254 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Atxn1P54254 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Atxn1P54254 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Atxn1P54254 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Atxn1P54254 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Atxn1P54254 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.15■□□□□ 0.34
Atxn1P54254 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC17.15■□□□□ 0.34
Atxn1P54254 AC164629.2-201ENSMUST00000217916 270 ntBASIC17.15■□□□□ 0.34
Atxn1P54254 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Atxn1P54254 Spr-ps1-201ENSMUST00000089584 605 ntBASIC17.15■□□□□ 0.34
Atxn1P54254 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Atxn1P54254 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.15■□□□□ 0.34
Atxn1P54254 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Atxn1P54254 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Atxn1P54254 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atxn1P54254 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC17.14■□□□□ 0.33
Atxn1P54254 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atxn1P54254 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Atxn1P54254 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Atxn1P54254 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Atxn1P54254 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.14■□□□□ 0.33
Atxn1P54254 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC17.14■□□□□ 0.33
Atxn1P54254 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Atxn1P54254 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atxn1P54254 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atxn1P54254 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atxn1P54254 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atxn1P54254 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atxn1P54254 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atxn1P54254 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atxn1P54254 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atxn1P54254 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Atxn1P54254 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Atxn1P54254 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.13■□□□□ 0.33
Atxn1P54254 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Atxn1P54254 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atxn1P54254 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Atxn1P54254 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.13■□□□□ 0.33
Atxn1P54254 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atxn1P54254 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atxn1P54254 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atxn1P54254 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atxn1P54254 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atxn1P54254 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atxn1P54254 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.12■□□□□ 0.33
Atxn1P54254 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atxn1P54254 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atxn1P54254 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.12■□□□□ 0.33
Atxn1P54254 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Atxn1P54254 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atxn1P54254 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atxn1P54254 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atxn1P54254 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atxn1P54254 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Atxn1P54254 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Atxn1P54254 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC17.12■□□□□ 0.33
Atxn1P54254 Gm27357-201ENSMUST00000183754 135 ntBASIC17.12■□□□□ 0.33
Atxn1P54254 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.12■□□□□ 0.33
Atxn1P54254 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atxn1P54254 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atxn1P54254 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atxn1P54254 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Atxn1P54254 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atxn1P54254 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Atxn1P54254 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.11■□□□□ 0.33
Atxn1P54254 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Atxn1P54254 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atxn1P54254 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atxn1P54254 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC17.11■□□□□ 0.33
Atxn1P54254 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
Atxn1P54254 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
Atxn1P54254 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
Atxn1P54254 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
Atxn1P54254 Gm28659-201ENSMUST00000188013 759 ntBASIC17.11■□□□□ 0.33
Atxn1P54254 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atxn1P54254 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atxn1P54254 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atxn1P54254 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Atxn1P54254 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Atxn1P54254 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.11■□□□□ 0.33
Atxn1P54254 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Atxn1P54254 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Atxn1P54254 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms