Protein–RNA interactions for Protein: P53776

Lhx4, LIM/homeobox protein Lhx4, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx4P53776 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lhx4P53776 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lhx4P53776 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lhx4P53776 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lhx4P53776 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lhx4P53776 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lhx4P53776 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Lhx4P53776 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lhx4P53776 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lhx4P53776 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lhx4P53776 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lhx4P53776 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC14.65□□□□□ -0.06
Lhx4P53776 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lhx4P53776 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lhx4P53776 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lhx4P53776 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lhx4P53776 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lhx4P53776 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lhx4P53776 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC14.65□□□□□ -0.06
Lhx4P53776 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lhx4P53776 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Lhx4P53776 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC14.65□□□□□ -0.06
Lhx4P53776 H2-K2-201ENSMUST00000174250 1049 ntBASIC14.65□□□□□ -0.06
Lhx4P53776 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Lhx4P53776 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC14.65□□□□□ -0.06
Lhx4P53776 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC14.65□□□□□ -0.06
Lhx4P53776 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lhx4P53776 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lhx4P53776 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lhx4P53776 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lhx4P53776 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lhx4P53776 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Lhx4P53776 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lhx4P53776 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Lhx4P53776 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Lhx4P53776 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Lhx4P53776 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Lhx4P53776 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Lhx4P53776 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Lhx4P53776 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
Lhx4P53776 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Lhx4P53776 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Lhx4P53776 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Lhx4P53776 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Lhx4P53776 Gm15378-201ENSMUST00000121894 207 ntBASIC14.64□□□□□ -0.07
Lhx4P53776 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Lhx4P53776 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC14.64□□□□□ -0.07
Lhx4P53776 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC14.64□□□□□ -0.07
Lhx4P53776 Alkbh1-212ENSMUST00000185301 408 ntBASIC14.64□□□□□ -0.07
Lhx4P53776 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC14.64□□□□□ -0.07
Lhx4P53776 Arhgef33-211ENSMUST00000225658 473 ntBASIC14.64□□□□□ -0.07
Lhx4P53776 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Lhx4P53776 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Lhx4P53776 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Lhx4P53776 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Lhx4P53776 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Lhx4P53776 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Lhx4P53776 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Lhx4P53776 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Lhx4P53776 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC14.63□□□□□ -0.07
Lhx4P53776 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Lhx4P53776 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Lhx4P53776 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Lhx4P53776 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC14.63□□□□□ -0.07
Lhx4P53776 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Lhx4P53776 Gm13181-201ENSMUST00000120117 1069 ntBASIC14.63□□□□□ -0.07
Lhx4P53776 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
Lhx4P53776 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Lhx4P53776 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Lhx4P53776 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Lhx4P53776 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Lhx4P53776 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Lhx4P53776 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Lhx4P53776 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lhx4P53776 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC14.62□□□□□ -0.07
Lhx4P53776 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
Lhx4P53776 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Lhx4P53776 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Lhx4P53776 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lhx4P53776 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Lhx4P53776 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lhx4P53776 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC14.62□□□□□ -0.07
Lhx4P53776 Gm10252-201ENSMUST00000209541 832 ntBASIC14.62□□□□□ -0.07
Lhx4P53776 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Lhx4P53776 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lhx4P53776 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lhx4P53776 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lhx4P53776 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lhx4P53776 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lhx4P53776 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lhx4P53776 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Lhx4P53776 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Lhx4P53776 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lhx4P53776 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lhx4P53776 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Lhx4P53776 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lhx4P53776 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
Lhx4P53776 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lhx4P53776 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Lhx4P53776 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms