Protein–RNA interactions for Protein: P51827

Aff3, AF4/FMR2 family member 3, mousemouse

Predictions only

Length 1,254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aff3P51827 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Aff3P51827 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Aff3P51827 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Aff3P51827 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Aff3P51827 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Aff3P51827 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Aff3P51827 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Aff3P51827 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Aff3P51827 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.16■□□□□ 0.5
Aff3P51827 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Aff3P51827 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Aff3P51827 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Aff3P51827 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC18.16■□□□□ 0.5
Aff3P51827 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC18.16■□□□□ 0.5
Aff3P51827 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC18.16■□□□□ 0.5
Aff3P51827 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC18.16■□□□□ 0.5
Aff3P51827 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC18.16■□□□□ 0.5
Aff3P51827 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Aff3P51827 Gm6443-201ENSMUST00000203599 874 ntBASIC18.16■□□□□ 0.5
Aff3P51827 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.16■□□□□ 0.5
Aff3P51827 AC164629.2-201ENSMUST00000217916 270 ntBASIC18.16■□□□□ 0.5
Aff3P51827 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC18.16■□□□□ 0.5
Aff3P51827 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Aff3P51827 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Aff3P51827 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Aff3P51827 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Aff3P51827 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Aff3P51827 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Aff3P51827 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Aff3P51827 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Aff3P51827 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Aff3P51827 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Aff3P51827 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Aff3P51827 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC18.15■□□□□ 0.5
Aff3P51827 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC18.15■□□□□ 0.5
Aff3P51827 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC18.15■□□□□ 0.5
Aff3P51827 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Aff3P51827 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Aff3P51827 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Aff3P51827 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Aff3P51827 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Aff3P51827 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Aff3P51827 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.15■□□□□ 0.5
Aff3P51827 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Aff3P51827 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Aff3P51827 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.15■□□□□ 0.5
Aff3P51827 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Aff3P51827 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Aff3P51827 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Aff3P51827 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Aff3P51827 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Aff3P51827 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
Aff3P51827 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.14■□□□□ 0.49
Aff3P51827 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Aff3P51827 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Aff3P51827 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Aff3P51827 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Aff3P51827 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Aff3P51827 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.14■□□□□ 0.49
Aff3P51827 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Aff3P51827 Gm37722-201ENSMUST00000193757 208 ntBASIC18.14■□□□□ 0.49
Aff3P51827 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Aff3P51827 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Aff3P51827 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Aff3P51827 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Aff3P51827 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Aff3P51827 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Aff3P51827 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Aff3P51827 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Aff3P51827 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Aff3P51827 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Aff3P51827 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Aff3P51827 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC18.13■□□□□ 0.49
Aff3P51827 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Aff3P51827 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Aff3P51827 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC18.13■□□□□ 0.49
Aff3P51827 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Aff3P51827 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
Aff3P51827 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Aff3P51827 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC18.13■□□□□ 0.49
Aff3P51827 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Aff3P51827 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC18.13■□□□□ 0.49
Aff3P51827 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Aff3P51827 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Aff3P51827 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.13■□□□□ 0.49
Aff3P51827 Idnk-204ENSMUST00000226010 1898 ntBASIC18.13■□□□□ 0.49
Aff3P51827 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Aff3P51827 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Aff3P51827 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Aff3P51827 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Aff3P51827 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Aff3P51827 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Aff3P51827 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
Aff3P51827 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Aff3P51827 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Aff3P51827 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Aff3P51827 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Aff3P51827 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Aff3P51827 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC18.12■□□□□ 0.49
Aff3P51827 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms