Protein–RNA interactions for Protein: P50586

Tub, Tubby protein, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TubP50586 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TubP50586 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TubP50586 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
TubP50586 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TubP50586 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
TubP50586 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
TubP50586 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
TubP50586 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.75■□□□□ 0.43
TubP50586 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TubP50586 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TubP50586 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TubP50586 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TubP50586 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TubP50586 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TubP50586 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.75■□□□□ 0.43
TubP50586 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
TubP50586 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
TubP50586 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TubP50586 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.74■□□□□ 0.43
TubP50586 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TubP50586 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TubP50586 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TubP50586 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
TubP50586 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.74■□□□□ 0.43
TubP50586 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.74■□□□□ 0.43
TubP50586 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.74■□□□□ 0.43
TubP50586 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.74■□□□□ 0.43
TubP50586 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TubP50586 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.74■□□□□ 0.43
TubP50586 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
TubP50586 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TubP50586 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
TubP50586 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TubP50586 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TubP50586 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TubP50586 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TubP50586 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
TubP50586 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TubP50586 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TubP50586 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
TubP50586 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TubP50586 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TubP50586 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
TubP50586 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.73■□□□□ 0.43
TubP50586 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TubP50586 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TubP50586 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TubP50586 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.73■□□□□ 0.43
TubP50586 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TubP50586 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TubP50586 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
TubP50586 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.73■□□□□ 0.43
TubP50586 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TubP50586 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TubP50586 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
TubP50586 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TubP50586 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TubP50586 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TubP50586 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TubP50586 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TubP50586 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
TubP50586 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TubP50586 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TubP50586 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.72■□□□□ 0.43
TubP50586 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TubP50586 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TubP50586 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TubP50586 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TubP50586 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.72■□□□□ 0.43
TubP50586 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
TubP50586 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
TubP50586 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TubP50586 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TubP50586 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TubP50586 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.71■□□□□ 0.43
TubP50586 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
TubP50586 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.71■□□□□ 0.43
TubP50586 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TubP50586 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.71■□□□□ 0.43
TubP50586 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TubP50586 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TubP50586 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TubP50586 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.71■□□□□ 0.43
TubP50586 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.71■□□□□ 0.43
TubP50586 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TubP50586 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TubP50586 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TubP50586 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TubP50586 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
TubP50586 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.71■□□□□ 0.42
TubP50586 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
TubP50586 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
TubP50586 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TubP50586 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TubP50586 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TubP50586 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TubP50586 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TubP50586 Gm7638-201ENSMUST00000121348 967 ntBASIC17.7■□□□□ 0.42
TubP50586 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TubP50586 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms