Protein–RNA interactions for Protein: P50516

Atp6v1a, V-type proton ATPase catalytic subunit A, mousemouse

Known RBP Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6v1aP50516 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Atp6v1aP50516 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Atp6v1aP50516 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC20.77■□□□□ 0.92
Atp6v1aP50516 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.77■□□□□ 0.92
Atp6v1aP50516 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Atp6v1aP50516 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Atp6v1aP50516 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Atp6v1aP50516 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Atp6v1aP50516 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC20.77■□□□□ 0.92
Atp6v1aP50516 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Atp6v1aP50516 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Atp6v1aP50516 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Atp6v1aP50516 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Atp6v1aP50516 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
Atp6v1aP50516 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Atp6v1aP50516 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC20.77■□□□□ 0.91
Atp6v1aP50516 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Atp6v1aP50516 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Atp6v1aP50516 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Atp6v1aP50516 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Atp6v1aP50516 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Atp6v1aP50516 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Atp6v1aP50516 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Atp6v1aP50516 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC20.76■□□□□ 0.91
Atp6v1aP50516 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC20.76■□□□□ 0.91
Atp6v1aP50516 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Atp6v1aP50516 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC20.76■□□□□ 0.91
Atp6v1aP50516 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Atp6v1aP50516 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Atp6v1aP50516 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.76■□□□□ 0.91
Atp6v1aP50516 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Atp6v1aP50516 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Atp6v1aP50516 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Atp6v1aP50516 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Atp6v1aP50516 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Atp6v1aP50516 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
Atp6v1aP50516 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Atp6v1aP50516 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Atp6v1aP50516 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Atp6v1aP50516 Gm34391-201ENSMUST00000203706 907 ntBASIC20.75■□□□□ 0.91
Atp6v1aP50516 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Atp6v1aP50516 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Atp6v1aP50516 AC122351.1-201ENSMUST00000220467 126 ntBASIC20.75■□□□□ 0.91
Atp6v1aP50516 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Atp6v1aP50516 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC20.75■□□□□ 0.91
Atp6v1aP50516 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC20.75■□□□□ 0.91
Atp6v1aP50516 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Atp6v1aP50516 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Atp6v1aP50516 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Atp6v1aP50516 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Atp6v1aP50516 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Atp6v1aP50516 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Atp6v1aP50516 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Atp6v1aP50516 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Atp6v1aP50516 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC20.74■□□□□ 0.91
Atp6v1aP50516 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC20.74■□□□□ 0.91
Atp6v1aP50516 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC20.74■□□□□ 0.91
Atp6v1aP50516 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Atp6v1aP50516 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Atp6v1aP50516 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Atp6v1aP50516 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
Atp6v1aP50516 AC154855.1-201ENSMUST00000227353 1458 ntBASIC20.74■□□□□ 0.91
Atp6v1aP50516 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Atp6v1aP50516 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Atp6v1aP50516 Idnk-204ENSMUST00000226010 1898 ntBASIC20.73■□□□□ 0.91
Atp6v1aP50516 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Atp6v1aP50516 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Atp6v1aP50516 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC20.73■□□□□ 0.91
Atp6v1aP50516 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Atp6v1aP50516 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Atp6v1aP50516 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC20.73■□□□□ 0.91
Atp6v1aP50516 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC20.73■□□□□ 0.91
Atp6v1aP50516 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC20.73■□□□□ 0.91
Atp6v1aP50516 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC20.73■□□□□ 0.91
Atp6v1aP50516 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Atp6v1aP50516 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Atp6v1aP50516 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC20.73■□□□□ 0.91
Atp6v1aP50516 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.73■□□□□ 0.91
Atp6v1aP50516 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
Atp6v1aP50516 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.73■□□□□ 0.91
Atp6v1aP50516 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Atp6v1aP50516 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.72■□□□□ 0.91
Atp6v1aP50516 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Atp6v1aP50516 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Atp6v1aP50516 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC20.72■□□□□ 0.91
Atp6v1aP50516 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Atp6v1aP50516 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Atp6v1aP50516 Cxcl14-202ENSMUST00000224801 1467 ntBASIC20.72■□□□□ 0.91
Atp6v1aP50516 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Atp6v1aP50516 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Atp6v1aP50516 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Atp6v1aP50516 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Atp6v1aP50516 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Atp6v1aP50516 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Atp6v1aP50516 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Atp6v1aP50516 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Atp6v1aP50516 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Atp6v1aP50516 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Atp6v1aP50516 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC20.71■□□□□ 0.91
Atp6v1aP50516 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms