Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Shmt1P50431 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Shmt1P50431 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Shmt1P50431 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Shmt1P50431 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Shmt1P50431 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Shmt1P50431 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Shmt1P50431 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Shmt1P50431 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Shmt1P50431 Gm37025-201ENSMUST00000195159 829 ntBASIC18.31■□□□□ 0.52
Shmt1P50431 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Shmt1P50431 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Shmt1P50431 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Shmt1P50431 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Shmt1P50431 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Shmt1P50431 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Shmt1P50431 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Shmt1P50431 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.31■□□□□ 0.52
Shmt1P50431 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Shmt1P50431 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Shmt1P50431 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Shmt1P50431 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Shmt1P50431 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Shmt1P50431 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Shmt1P50431 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Shmt1P50431 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.3■□□□□ 0.52
Shmt1P50431 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Shmt1P50431 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Shmt1P50431 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.3■□□□□ 0.52
Shmt1P50431 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Shmt1P50431 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Shmt1P50431 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Shmt1P50431 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
Shmt1P50431 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Shmt1P50431 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC18.29■□□□□ 0.52
Shmt1P50431 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Shmt1P50431 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Shmt1P50431 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC18.29■□□□□ 0.52
Shmt1P50431 Gm9731-201ENSMUST00000209480 747 ntBASIC18.29■□□□□ 0.52
Shmt1P50431 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Shmt1P50431 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Shmt1P50431 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Shmt1P50431 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.29■□□□□ 0.52
Shmt1P50431 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Shmt1P50431 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Shmt1P50431 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Shmt1P50431 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Shmt1P50431 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Shmt1P50431 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Shmt1P50431 Gm17661-201ENSMUST00000170317 270 ntBASIC18.28■□□□□ 0.52
Shmt1P50431 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.28■□□□□ 0.52
Shmt1P50431 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.28■□□□□ 0.52
Shmt1P50431 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Shmt1P50431 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Shmt1P50431 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Shmt1P50431 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Shmt1P50431 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Shmt1P50431 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
Shmt1P50431 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Shmt1P50431 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Shmt1P50431 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Shmt1P50431 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Shmt1P50431 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Shmt1P50431 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Shmt1P50431 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Shmt1P50431 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Shmt1P50431 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Shmt1P50431 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.27■□□□□ 0.52
Shmt1P50431 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.27■□□□□ 0.52
Shmt1P50431 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Shmt1P50431 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Shmt1P50431 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC18.27■□□□□ 0.52
Shmt1P50431 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Shmt1P50431 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Shmt1P50431 Il3ra-202ENSMUST00000223589 738 ntBASIC18.27■□□□□ 0.52
Shmt1P50431 AC159205.6-201ENSMUST00000224935 887 ntBASIC18.27■□□□□ 0.52
Shmt1P50431 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Shmt1P50431 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Shmt1P50431 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Shmt1P50431 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Shmt1P50431 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Shmt1P50431 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Shmt1P50431 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Shmt1P50431 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.27■□□□□ 0.51
Shmt1P50431 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Shmt1P50431 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Shmt1P50431 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
Shmt1P50431 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Shmt1P50431 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Shmt1P50431 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Shmt1P50431 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.26■□□□□ 0.51
Shmt1P50431 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Shmt1P50431 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.26■□□□□ 0.51
Shmt1P50431 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Shmt1P50431 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.26■□□□□ 0.51
Shmt1P50431 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.26■□□□□ 0.51
Shmt1P50431 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Shmt1P50431 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Shmt1P50431 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Shmt1P50431 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms