Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx2-1P50220 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx2-1P50220 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Nkx2-1P50220 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Nkx2-1P50220 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Nkx2-1P50220 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx2-1P50220 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Nkx2-1P50220 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx2-1P50220 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx2-1P50220 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx2-1P50220 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Nkx2-1P50220 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx2-1P50220 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Nkx2-1P50220 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx2-1P50220 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC14.4□□□□□ -0.1
Nkx2-1P50220 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx2-1P50220 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC14.4□□□□□ -0.11
Nkx2-1P50220 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Nkx2-1P50220 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx2-1P50220 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx2-1P50220 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx2-1P50220 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC14.39□□□□□ -0.11
Nkx2-1P50220 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx2-1P50220 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx2-1P50220 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx2-1P50220 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx2-1P50220 Gm13146-201ENSMUST00000118508 780 ntBASIC14.39□□□□□ -0.11
Nkx2-1P50220 Gm13534-201ENSMUST00000121169 513 ntBASIC14.39□□□□□ -0.11
Nkx2-1P50220 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx2-1P50220 Gm10493-201ENSMUST00000097270 612 ntBASIC14.39□□□□□ -0.11
Nkx2-1P50220 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx2-1P50220 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx2-1P50220 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx2-1P50220 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Nkx2-1P50220 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx2-1P50220 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx2-1P50220 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx2-1P50220 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC14.39□□□□□ -0.11
Nkx2-1P50220 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx2-1P50220 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx2-1P50220 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx2-1P50220 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx2-1P50220 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx2-1P50220 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC14.38□□□□□ -0.11
Nkx2-1P50220 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx2-1P50220 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC14.38□□□□□ -0.11
Nkx2-1P50220 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx2-1P50220 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx2-1P50220 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx2-1P50220 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx2-1P50220 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx2-1P50220 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx2-1P50220 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx2-1P50220 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Nkx2-1P50220 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx2-1P50220 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx2-1P50220 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx2-1P50220 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx2-1P50220 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx2-1P50220 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx2-1P50220 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC14.37□□□□□ -0.11
Nkx2-1P50220 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Nkx2-1P50220 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx2-1P50220 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx2-1P50220 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx2-1P50220 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC14.37□□□□□ -0.11
Nkx2-1P50220 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx2-1P50220 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC14.37□□□□□ -0.11
Nkx2-1P50220 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx2-1P50220 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Nkx2-1P50220 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx2-1P50220 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx2-1P50220 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx2-1P50220 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx2-1P50220 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Nkx2-1P50220 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx2-1P50220 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx2-1P50220 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx2-1P50220 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx2-1P50220 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC14.36□□□□□ -0.11
Nkx2-1P50220 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx2-1P50220 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx2-1P50220 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx2-1P50220 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx2-1P50220 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx2-1P50220 Hivep3-201ENSMUST00000084306 2973 ntBASIC14.36□□□□□ -0.11
Nkx2-1P50220 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Nkx2-1P50220 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Nkx2-1P50220 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx2-1P50220 Gm13234-201ENSMUST00000120010 747 ntBASIC14.36□□□□□ -0.11
Nkx2-1P50220 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC14.36□□□□□ -0.11
Nkx2-1P50220 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC14.36□□□□□ -0.11
Nkx2-1P50220 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx2-1P50220 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx2-1P50220 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx2-1P50220 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx2-1P50220 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx2-1P50220 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx2-1P50220 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx2-1P50220 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms