Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC15.67■□□□□ 0.1
Rfx3P48381 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rfx3P48381 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rfx3P48381 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Rfx3P48381 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC15.67■□□□□ 0.1
Rfx3P48381 Gm28265-201ENSMUST00000188201 2319 ntBASIC15.67■□□□□ 0.1
Rfx3P48381 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rfx3P48381 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rfx3P48381 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rfx3P48381 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rfx3P48381 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rfx3P48381 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rfx3P48381 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rfx3P48381 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Rfx3P48381 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Rfx3P48381 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Rfx3P48381 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rfx3P48381 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Rfx3P48381 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Rfx3P48381 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rfx3P48381 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Rfx3P48381 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rfx3P48381 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rfx3P48381 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rfx3P48381 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Rfx3P48381 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rfx3P48381 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC15.65■□□□□ 0.1
Rfx3P48381 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Rfx3P48381 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rfx3P48381 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rfx3P48381 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rfx3P48381 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Rfx3P48381 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rfx3P48381 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rfx3P48381 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC15.65■□□□□ 0.1
Rfx3P48381 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC15.65■□□□□ 0.1
Rfx3P48381 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Rfx3P48381 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rfx3P48381 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rfx3P48381 AC122769.4-201ENSMUST00000228166 901 ntBASIC15.65■□□□□ 0.1
Rfx3P48381 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rfx3P48381 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Rfx3P48381 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rfx3P48381 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC15.65■□□□□ 0.1
Rfx3P48381 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rfx3P48381 Gm45774-201ENSMUST00000211992 2665 ntBASIC15.65■□□□□ 0.1
Rfx3P48381 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rfx3P48381 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rfx3P48381 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rfx3P48381 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rfx3P48381 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rfx3P48381 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rfx3P48381 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC15.64■□□□□ 0.09
Rfx3P48381 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rfx3P48381 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rfx3P48381 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC15.64■□□□□ 0.09
Rfx3P48381 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Rfx3P48381 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC15.64■□□□□ 0.09
Rfx3P48381 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rfx3P48381 Gm15847-201ENSMUST00000121417 1065 ntBASIC15.64■□□□□ 0.09
Rfx3P48381 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Rfx3P48381 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC15.64■□□□□ 0.09
Rfx3P48381 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Rfx3P48381 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Rfx3P48381 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC15.64■□□□□ 0.09
Rfx3P48381 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rfx3P48381 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Rfx3P48381 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rfx3P48381 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rfx3P48381 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Rfx3P48381 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rfx3P48381 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Rfx3P48381 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rfx3P48381 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Rfx3P48381 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rfx3P48381 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC15.63■□□□□ 0.09
Rfx3P48381 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rfx3P48381 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rfx3P48381 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Rfx3P48381 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Rfx3P48381 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rfx3P48381 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rfx3P48381 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC15.63■□□□□ 0.09
Rfx3P48381 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Rfx3P48381 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rfx3P48381 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
Rfx3P48381 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rfx3P48381 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rfx3P48381 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Rfx3P48381 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rfx3P48381 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rfx3P48381 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rfx3P48381 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rfx3P48381 Gm11927-201ENSMUST00000118472 759 ntBASIC15.62■□□□□ 0.09
Rfx3P48381 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC15.62■□□□□ 0.09
Rfx3P48381 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC15.62■□□□□ 0.09
Rfx3P48381 Gm2559-201ENSMUST00000201323 363 ntBASIC15.62■□□□□ 0.09
Rfx3P48381 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC15.62■□□□□ 0.09
Rfx3P48381 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rfx3P48381 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms