Protein–RNA interactions for Protein: P46935

Nedd4, E3 ubiquitin-protein ligase NEDD4, mousemouse

Known RBP Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd4P46935 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Nedd4P46935 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Nedd4P46935 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Nedd4P46935 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Nedd4P46935 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC20.83■□□□□ 0.92
Nedd4P46935 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Nedd4P46935 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC20.83■□□□□ 0.92
Nedd4P46935 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Nedd4P46935 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nedd4P46935 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nedd4P46935 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nedd4P46935 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nedd4P46935 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nedd4P46935 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Nedd4P46935 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nedd4P46935 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Nedd4P46935 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nedd4P46935 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nedd4P46935 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Nedd4P46935 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Nedd4P46935 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nedd4P46935 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC20.82■□□□□ 0.92
Nedd4P46935 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Nedd4P46935 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Nedd4P46935 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nedd4P46935 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nedd4P46935 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nedd4P46935 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Nedd4P46935 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nedd4P46935 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Nedd4P46935 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nedd4P46935 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Nedd4P46935 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.82■□□□□ 0.92
Nedd4P46935 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC20.81■□□□□ 0.92
Nedd4P46935 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Nedd4P46935 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nedd4P46935 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nedd4P46935 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Nedd4P46935 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nedd4P46935 Gm12644-201ENSMUST00000119935 606 ntBASIC20.81■□□□□ 0.92
Nedd4P46935 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nedd4P46935 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Nedd4P46935 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nedd4P46935 Zkscan4-202ENSMUST00000225845 1506 ntBASIC20.81■□□□□ 0.92
Nedd4P46935 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nedd4P46935 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Nedd4P46935 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Nedd4P46935 Gm38342-201ENSMUST00000195710 2980 ntBASIC20.8■□□□□ 0.92
Nedd4P46935 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Nedd4P46935 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC20.8■□□□□ 0.92
Nedd4P46935 Mir5131-201ENSMUST00000175426 93 ntBASIC20.8■□□□□ 0.92
Nedd4P46935 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC20.8■□□□□ 0.92
Nedd4P46935 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Nedd4P46935 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Nedd4P46935 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Nedd4P46935 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC20.8■□□□□ 0.92
Nedd4P46935 Gm6190-201ENSMUST00000220683 1374 ntBASIC20.8■□□□□ 0.92
Nedd4P46935 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Nedd4P46935 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nedd4P46935 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nedd4P46935 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nedd4P46935 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nedd4P46935 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Nedd4P46935 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nedd4P46935 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nedd4P46935 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nedd4P46935 Gm7862-201ENSMUST00000121461 292 ntBASIC20.79■□□□□ 0.92
Nedd4P46935 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Nedd4P46935 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC20.79■□□□□ 0.92
Nedd4P46935 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nedd4P46935 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nedd4P46935 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nedd4P46935 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nedd4P46935 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nedd4P46935 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nedd4P46935 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nedd4P46935 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nedd4P46935 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nedd4P46935 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.78■□□□□ 0.92
Nedd4P46935 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nedd4P46935 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
Nedd4P46935 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC20.78■□□□□ 0.92
Nedd4P46935 Gm7063-201ENSMUST00000186840 981 ntBASIC20.78■□□□□ 0.92
Nedd4P46935 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.78■□□□□ 0.92
Nedd4P46935 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC20.78■□□□□ 0.92
Nedd4P46935 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Nedd4P46935 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nedd4P46935 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nedd4P46935 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Nedd4P46935 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nedd4P46935 Tgds-204ENSMUST00000228543 1594 ntBASIC20.77■□□□□ 0.92
Nedd4P46935 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC20.77■□□□□ 0.92
Nedd4P46935 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nedd4P46935 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC20.77■□□□□ 0.92
Nedd4P46935 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC20.77■□□□□ 0.92
Nedd4P46935 Gm6376-201ENSMUST00000209407 580 ntBASIC20.77■□□□□ 0.92
Nedd4P46935 Gm6296-201ENSMUST00000222599 943 ntBASIC20.77■□□□□ 0.92
Nedd4P46935 AC125350.1-201ENSMUST00000225115 903 ntBASIC20.77■□□□□ 0.92
Nedd4P46935 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nedd4P46935 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms