Protein–RNA interactions for Protein: P43028

Gdf6, Growth/differentiation factor 6, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gdf6P43028 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gdf6P43028 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gdf6P43028 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gdf6P43028 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gdf6P43028 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
Gdf6P43028 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.5
Gdf6P43028 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Gdf6P43028 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Gdf6P43028 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gdf6P43028 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gdf6P43028 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gdf6P43028 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC18.2■□□□□ 0.5
Gdf6P43028 Gm3272-201ENSMUST00000181181 1229 ntBASIC18.2■□□□□ 0.5
Gdf6P43028 Gm7367-201ENSMUST00000057611 492 ntBASIC18.2■□□□□ 0.5
Gdf6P43028 Gm10566-201ENSMUST00000086739 996 ntBASIC18.2■□□□□ 0.5
Gdf6P43028 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Gdf6P43028 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gdf6P43028 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Gdf6P43028 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gdf6P43028 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gdf6P43028 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gdf6P43028 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gdf6P43028 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gdf6P43028 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gdf6P43028 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gdf6P43028 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gdf6P43028 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gdf6P43028 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Gdf6P43028 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.19■□□□□ 0.5
Gdf6P43028 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC18.19■□□□□ 0.5
Gdf6P43028 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC18.19■□□□□ 0.5
Gdf6P43028 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gdf6P43028 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Gdf6P43028 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Gdf6P43028 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gdf6P43028 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gdf6P43028 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gdf6P43028 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Gdf6P43028 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gdf6P43028 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gdf6P43028 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Gdf6P43028 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.18■□□□□ 0.5
Gdf6P43028 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gdf6P43028 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gdf6P43028 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.18■□□□□ 0.5
Gdf6P43028 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gdf6P43028 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gdf6P43028 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Gdf6P43028 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gdf6P43028 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gdf6P43028 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gdf6P43028 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gdf6P43028 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gdf6P43028 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gdf6P43028 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gdf6P43028 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Gdf6P43028 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gdf6P43028 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC18.17■□□□□ 0.5
Gdf6P43028 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gdf6P43028 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gdf6P43028 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gdf6P43028 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC18.17■□□□□ 0.5
Gdf6P43028 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Gdf6P43028 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Gdf6P43028 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.17■□□□□ 0.5
Gdf6P43028 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC18.17■□□□□ 0.5
Gdf6P43028 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Gdf6P43028 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Gdf6P43028 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gdf6P43028 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Gdf6P43028 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.17■□□□□ 0.5
Gdf6P43028 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gdf6P43028 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gdf6P43028 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gdf6P43028 Gm8258-201ENSMUST00000055593 1449 ntBASIC18.16■□□□□ 0.5
Gdf6P43028 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Gdf6P43028 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gdf6P43028 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gdf6P43028 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gdf6P43028 Gm18958-201ENSMUST00000174258 762 ntBASIC18.16■□□□□ 0.5
Gdf6P43028 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gdf6P43028 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gdf6P43028 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gdf6P43028 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
Gdf6P43028 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gdf6P43028 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gdf6P43028 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.16■□□□□ 0.5
Gdf6P43028 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Gdf6P43028 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gdf6P43028 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Gdf6P43028 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gdf6P43028 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gdf6P43028 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gdf6P43028 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Gdf6P43028 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Gdf6P43028 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC18.15■□□□□ 0.5
Gdf6P43028 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gdf6P43028 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Gdf6P43028 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gdf6P43028 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms