Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
VhlP40338 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
VhlP40338 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VhlP40338 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
VhlP40338 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VhlP40338 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VhlP40338 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VhlP40338 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VhlP40338 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VhlP40338 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VhlP40338 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC14.22□□□□□ -0.13
VhlP40338 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC14.22□□□□□ -0.13
VhlP40338 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VhlP40338 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VhlP40338 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VhlP40338 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VhlP40338 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VhlP40338 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VhlP40338 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VhlP40338 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VhlP40338 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
VhlP40338 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
VhlP40338 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VhlP40338 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VhlP40338 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
VhlP40338 Gm13509-201ENSMUST00000119733 1308 ntBASIC14.21□□□□□ -0.13
VhlP40338 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
VhlP40338 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
VhlP40338 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VhlP40338 Gm7514-201ENSMUST00000209475 934 ntBASIC14.21□□□□□ -0.13
VhlP40338 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
VhlP40338 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
VhlP40338 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC14.21□□□□□ -0.13
VhlP40338 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
VhlP40338 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
VhlP40338 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
VhlP40338 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
VhlP40338 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC14.21□□□□□ -0.14
VhlP40338 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
VhlP40338 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
VhlP40338 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
VhlP40338 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
VhlP40338 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
VhlP40338 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
VhlP40338 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
VhlP40338 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC14.2□□□□□ -0.14
VhlP40338 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VhlP40338 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
VhlP40338 Gm8495-201ENSMUST00000188740 694 ntBASIC14.2□□□□□ -0.14
VhlP40338 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
VhlP40338 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VhlP40338 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
VhlP40338 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
VhlP40338 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VhlP40338 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VhlP40338 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VhlP40338 Gm37166-201ENSMUST00000195473 2474 ntBASIC14.2□□□□□ -0.14
VhlP40338 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VhlP40338 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VhlP40338 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
VhlP40338 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
VhlP40338 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VhlP40338 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC14.19□□□□□ -0.14
VhlP40338 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC14.19□□□□□ -0.14
VhlP40338 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
VhlP40338 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC14.19□□□□□ -0.14
VhlP40338 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC14.19□□□□□ -0.14
VhlP40338 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VhlP40338 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
VhlP40338 Gm10493-201ENSMUST00000097270 612 ntBASIC14.19□□□□□ -0.14
VhlP40338 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
VhlP40338 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VhlP40338 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VhlP40338 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VhlP40338 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VhlP40338 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
VhlP40338 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
VhlP40338 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VhlP40338 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VhlP40338 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC14.18□□□□□ -0.14
VhlP40338 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VhlP40338 Gm2399-201ENSMUST00000104944 225 ntBASIC14.18□□□□□ -0.14
VhlP40338 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC14.18□□□□□ -0.14
VhlP40338 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC14.18□□□□□ -0.14
VhlP40338 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
VhlP40338 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC14.18□□□□□ -0.14
VhlP40338 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VhlP40338 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VhlP40338 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VhlP40338 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
VhlP40338 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
VhlP40338 Gm11841-201ENSMUST00000117060 1963 ntBASIC14.18□□□□□ -0.14
VhlP40338 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VhlP40338 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VhlP40338 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
VhlP40338 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC14.18□□□□□ -0.14
VhlP40338 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
VhlP40338 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VhlP40338 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
VhlP40338 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms