Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Timp3P39876 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Timp3P39876 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Timp3P39876 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Timp3P39876 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Timp3P39876 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Timp3P39876 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Timp3P39876 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Timp3P39876 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Timp3P39876 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Timp3P39876 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Timp3P39876 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Timp3P39876 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Timp3P39876 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Timp3P39876 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Timp3P39876 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Timp3P39876 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Timp3P39876 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Timp3P39876 Mir2861-201ENSMUST00000175539 82 ntBASIC14.18□□□□□ -0.14
Timp3P39876 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Timp3P39876 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Timp3P39876 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Timp3P39876 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Timp3P39876 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Timp3P39876 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Timp3P39876 Gm38345-201ENSMUST00000192635 1748 ntBASIC14.18□□□□□ -0.14
Timp3P39876 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Timp3P39876 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Timp3P39876 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Timp3P39876 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC14.17□□□□□ -0.14
Timp3P39876 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Timp3P39876 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Timp3P39876 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Timp3P39876 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Timp3P39876 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC14.17□□□□□ -0.14
Timp3P39876 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Timp3P39876 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Timp3P39876 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Timp3P39876 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Timp3P39876 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Timp3P39876 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Timp3P39876 AC153881.2-201ENSMUST00000214877 204 ntBASIC14.17□□□□□ -0.14
Timp3P39876 Gm30025-201ENSMUST00000218555 728 ntBASIC14.17□□□□□ -0.14
Timp3P39876 AC121577.1-201ENSMUST00000227302 707 ntBASIC14.17□□□□□ -0.14
Timp3P39876 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Timp3P39876 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Timp3P39876 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Timp3P39876 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Timp3P39876 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Timp3P39876 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Timp3P39876 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Timp3P39876 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Timp3P39876 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Timp3P39876 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Timp3P39876 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Timp3P39876 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Timp3P39876 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Timp3P39876 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Timp3P39876 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Timp3P39876 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Timp3P39876 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Timp3P39876 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Timp3P39876 Gm10654-201ENSMUST00000098653 1633 ntBASIC14.16□□□□□ -0.14
Timp3P39876 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Timp3P39876 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Timp3P39876 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC14.16□□□□□ -0.14
Timp3P39876 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Timp3P39876 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Timp3P39876 Gm9987-201ENSMUST00000069768 567 ntBASIC14.16□□□□□ -0.14
Timp3P39876 Gm7292-201ENSMUST00000194706 2527 ntBASIC14.16□□□□□ -0.14
Timp3P39876 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Timp3P39876 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Timp3P39876 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Timp3P39876 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Timp3P39876 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Timp3P39876 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Timp3P39876 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Timp3P39876 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Timp3P39876 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Timp3P39876 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Timp3P39876 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Timp3P39876 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Timp3P39876 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC14.15□□□□□ -0.14
Timp3P39876 Gm43799-201ENSMUST00000201845 579 ntBASIC14.15□□□□□ -0.14
Timp3P39876 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC14.15□□□□□ -0.14
Timp3P39876 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Timp3P39876 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Timp3P39876 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Timp3P39876 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Timp3P39876 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Timp3P39876 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Timp3P39876 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Timp3P39876 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Timp3P39876 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Timp3P39876 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Timp3P39876 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.15
Timp3P39876 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Timp3P39876 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.15
Timp3P39876 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Timp3P39876 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms