Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
HmgclP38060 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HmgclP38060 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
HmgclP38060 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
HmgclP38060 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HmgclP38060 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.05■□□□□ 0.32
HmgclP38060 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
HmgclP38060 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HmgclP38060 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HmgclP38060 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HmgclP38060 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HmgclP38060 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HmgclP38060 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HmgclP38060 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HmgclP38060 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.04■□□□□ 0.32
HmgclP38060 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.04■□□□□ 0.32
HmgclP38060 Gm38027-201ENSMUST00000192315 235 ntBASIC17.04■□□□□ 0.32
HmgclP38060 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HmgclP38060 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HmgclP38060 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
HmgclP38060 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
HmgclP38060 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
HmgclP38060 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HmgclP38060 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HmgclP38060 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
HmgclP38060 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.04■□□□□ 0.32
HmgclP38060 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
HmgclP38060 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HmgclP38060 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HmgclP38060 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HmgclP38060 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HmgclP38060 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HmgclP38060 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HmgclP38060 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HmgclP38060 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.03■□□□□ 0.32
HmgclP38060 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HmgclP38060 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HmgclP38060 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HmgclP38060 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HmgclP38060 Gm17661-201ENSMUST00000170317 270 ntBASIC17.03■□□□□ 0.32
HmgclP38060 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.03■□□□□ 0.32
HmgclP38060 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
HmgclP38060 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HmgclP38060 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HmgclP38060 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HmgclP38060 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HmgclP38060 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HmgclP38060 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HmgclP38060 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
HmgclP38060 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
HmgclP38060 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HmgclP38060 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HmgclP38060 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.03■□□□□ 0.32
HmgclP38060 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.03■□□□□ 0.32
HmgclP38060 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
HmgclP38060 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
HmgclP38060 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
HmgclP38060 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HmgclP38060 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HmgclP38060 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.02■□□□□ 0.32
HmgclP38060 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HmgclP38060 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HmgclP38060 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HmgclP38060 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.02■□□□□ 0.32
HmgclP38060 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
HmgclP38060 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HmgclP38060 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HmgclP38060 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.02■□□□□ 0.32
HmgclP38060 Odf3b-204ENSMUST00000227834 930 ntBASIC17.02■□□□□ 0.32
HmgclP38060 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
HmgclP38060 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
HmgclP38060 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
HmgclP38060 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
HmgclP38060 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HmgclP38060 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
HmgclP38060 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HmgclP38060 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HmgclP38060 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HmgclP38060 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HmgclP38060 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HmgclP38060 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HmgclP38060 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HmgclP38060 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.01■□□□□ 0.31
HmgclP38060 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HmgclP38060 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HmgclP38060 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.01■□□□□ 0.31
HmgclP38060 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HmgclP38060 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HmgclP38060 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HmgclP38060 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.01■□□□□ 0.31
HmgclP38060 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HmgclP38060 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HmgclP38060 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
HmgclP38060 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
HmgclP38060 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HmgclP38060 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HmgclP38060 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17■□□□□ 0.31
HmgclP38060 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17■□□□□ 0.31
HmgclP38060 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17■□□□□ 0.31
HmgclP38060 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms