Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Slc6a11P31650 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Slc6a11P31650 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Slc6a11P31650 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Slc6a11P31650 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Slc6a11P31650 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc6a11P31650 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.45■□□□□ 0.22
Slc6a11P31650 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc6a11P31650 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc6a11P31650 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc6a11P31650 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.45■□□□□ 0.22
Slc6a11P31650 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc6a11P31650 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Slc6a11P31650 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Slc6a11P31650 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Slc6a11P31650 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.45■□□□□ 0.22
Slc6a11P31650 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc6a11P31650 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.45■□□□□ 0.22
Slc6a11P31650 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Slc6a11P31650 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc6a11P31650 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc6a11P31650 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc6a11P31650 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Slc6a11P31650 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slc6a11P31650 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Slc6a11P31650 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slc6a11P31650 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Slc6a11P31650 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.44■□□□□ 0.22
Slc6a11P31650 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.44■□□□□ 0.22
Slc6a11P31650 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Slc6a11P31650 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slc6a11P31650 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Slc6a11P31650 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Slc6a11P31650 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slc6a11P31650 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slc6a11P31650 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.44■□□□□ 0.22
Slc6a11P31650 Gm13509-201ENSMUST00000119733 1308 ntBASIC16.44■□□□□ 0.22
Slc6a11P31650 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slc6a11P31650 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slc6a11P31650 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc6a11P31650 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc6a11P31650 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc6a11P31650 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Slc6a11P31650 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.43■□□□□ 0.22
Slc6a11P31650 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC16.43■□□□□ 0.22
Slc6a11P31650 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Slc6a11P31650 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.43■□□□□ 0.22
Slc6a11P31650 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc6a11P31650 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc6a11P31650 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc6a11P31650 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Slc6a11P31650 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc6a11P31650 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Slc6a11P31650 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc6a11P31650 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc6a11P31650 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc6a11P31650 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc6a11P31650 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc6a11P31650 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc6a11P31650 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc6a11P31650 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc6a11P31650 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc6a11P31650 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.42■□□□□ 0.22
Slc6a11P31650 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Slc6a11P31650 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC16.42■□□□□ 0.22
Slc6a11P31650 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC16.42■□□□□ 0.22
Slc6a11P31650 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Slc6a11P31650 AC140264.2-202ENSMUST00000218746 817 ntBASIC16.42■□□□□ 0.22
Slc6a11P31650 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc6a11P31650 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc6a11P31650 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Slc6a11P31650 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
Slc6a11P31650 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Slc6a11P31650 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.42■□□□□ 0.22
Slc6a11P31650 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc6a11P31650 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Slc6a11P31650 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc6a11P31650 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc6a11P31650 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.42■□□□□ 0.22
Slc6a11P31650 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc6a11P31650 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc6a11P31650 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc6a11P31650 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.41■□□□□ 0.22
Slc6a11P31650 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc6a11P31650 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Slc6a11P31650 Gm715-201ENSMUST00000117865 831 ntBASIC16.41■□□□□ 0.22
Slc6a11P31650 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Slc6a11P31650 AC154649.1-201ENSMUST00000227392 384 ntBASIC16.41■□□□□ 0.22
Slc6a11P31650 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Slc6a11P31650 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Slc6a11P31650 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc6a11P31650 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc6a11P31650 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.41■□□□□ 0.22
Slc6a11P31650 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc6a11P31650 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Slc6a11P31650 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Slc6a11P31650 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc6a11P31650 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc6a11P31650 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Slc6a11P31650 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms