Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Vcam1P29533 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Vcam1P29533 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Vcam1P29533 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Vcam1P29533 Gm27000-201ENSMUST00000182943 842 ntBASIC19.96■□□□□ 0.79
Vcam1P29533 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Vcam1P29533 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Vcam1P29533 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Vcam1P29533 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Vcam1P29533 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.96■□□□□ 0.79
Vcam1P29533 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Vcam1P29533 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC19.96■□□□□ 0.79
Vcam1P29533 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Vcam1P29533 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Vcam1P29533 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Vcam1P29533 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Vcam1P29533 Mir770-201ENSMUST00000103252 94 ntBASIC19.95■□□□□ 0.78
Vcam1P29533 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Vcam1P29533 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC19.95■□□□□ 0.78
Vcam1P29533 Gm27741-201ENSMUST00000185060 237 ntBASIC19.95■□□□□ 0.78
Vcam1P29533 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Vcam1P29533 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Vcam1P29533 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Vcam1P29533 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Vcam1P29533 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Vcam1P29533 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Vcam1P29533 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Vcam1P29533 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Vcam1P29533 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Vcam1P29533 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
Vcam1P29533 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.94■□□□□ 0.78
Vcam1P29533 AC130713.1-201ENSMUST00000228853 1096 ntBASIC19.94■□□□□ 0.78
Vcam1P29533 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Vcam1P29533 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Vcam1P29533 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Vcam1P29533 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Vcam1P29533 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Vcam1P29533 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Vcam1P29533 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC19.93■□□□□ 0.78
Vcam1P29533 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Vcam1P29533 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC19.93■□□□□ 0.78
Vcam1P29533 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
Vcam1P29533 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Vcam1P29533 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Vcam1P29533 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Vcam1P29533 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Vcam1P29533 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.93■□□□□ 0.78
Vcam1P29533 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Vcam1P29533 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Vcam1P29533 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Vcam1P29533 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
Vcam1P29533 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Vcam1P29533 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Vcam1P29533 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Vcam1P29533 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Vcam1P29533 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Vcam1P29533 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Vcam1P29533 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Vcam1P29533 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC19.92■□□□□ 0.78
Vcam1P29533 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Vcam1P29533 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC19.92■□□□□ 0.78
Vcam1P29533 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Vcam1P29533 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Vcam1P29533 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Vcam1P29533 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Vcam1P29533 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Vcam1P29533 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Vcam1P29533 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Vcam1P29533 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
Vcam1P29533 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vcam1P29533 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vcam1P29533 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Vcam1P29533 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vcam1P29533 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vcam1P29533 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vcam1P29533 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vcam1P29533 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vcam1P29533 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vcam1P29533 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vcam1P29533 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vcam1P29533 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vcam1P29533 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vcam1P29533 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vcam1P29533 Gm6623-201ENSMUST00000173570 544 ntBASIC19.9■□□□□ 0.78
Vcam1P29533 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC19.9■□□□□ 0.78
Vcam1P29533 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC19.9■□□□□ 0.78
Vcam1P29533 Gm28033-201ENSMUST00000184224 96 ntBASIC19.9■□□□□ 0.78
Vcam1P29533 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC19.9■□□□□ 0.78
Vcam1P29533 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Vcam1P29533 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Vcam1P29533 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Vcam1P29533 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vcam1P29533 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Vcam1P29533 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vcam1P29533 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.9■□□□□ 0.78
Vcam1P29533 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Vcam1P29533 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.9■□□□□ 0.78
Vcam1P29533 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.9■□□□□ 0.78
Vcam1P29533 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Vcam1P29533 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms