Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Mmp3P28862 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Mmp3P28862 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Mmp3P28862 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Mmp3P28862 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.55■□□□□ 0.56
Mmp3P28862 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Mmp3P28862 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Mmp3P28862 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Mmp3P28862 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC18.55■□□□□ 0.56
Mmp3P28862 Gm5587-201ENSMUST00000206270 674 ntBASIC18.55■□□□□ 0.56
Mmp3P28862 AC154471.1-201ENSMUST00000224418 436 ntBASIC18.55■□□□□ 0.56
Mmp3P28862 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Mmp3P28862 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Mmp3P28862 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Mmp3P28862 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Mmp3P28862 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Mmp3P28862 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Mmp3P28862 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Mmp3P28862 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Mmp3P28862 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
Mmp3P28862 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Mmp3P28862 Gm9013-201ENSMUST00000132939 882 ntBASIC18.54■□□□□ 0.56
Mmp3P28862 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Mmp3P28862 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.54■□□□□ 0.56
Mmp3P28862 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.54■□□□□ 0.56
Mmp3P28862 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.54■□□□□ 0.56
Mmp3P28862 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mmp3P28862 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Mmp3P28862 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mmp3P28862 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mmp3P28862 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Mmp3P28862 Gm26039-201ENSMUST00000158152 144 ntBASIC18.53■□□□□ 0.56
Mmp3P28862 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Mmp3P28862 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mmp3P28862 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Mmp3P28862 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mmp3P28862 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.53■□□□□ 0.56
Mmp3P28862 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mmp3P28862 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Mmp3P28862 Actl10-202ENSMUST00000226583 1501 ntBASIC18.53■□□□□ 0.56
Mmp3P28862 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mmp3P28862 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Mmp3P28862 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Mmp3P28862 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Mmp3P28862 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC18.52■□□□□ 0.56
Mmp3P28862 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.52■□□□□ 0.56
Mmp3P28862 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Mmp3P28862 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Mmp3P28862 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC18.52■□□□□ 0.56
Mmp3P28862 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Mmp3P28862 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC18.52■□□□□ 0.56
Mmp3P28862 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.52■□□□□ 0.56
Mmp3P28862 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Mmp3P28862 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Mmp3P28862 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Mmp3P28862 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Mmp3P28862 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Mmp3P28862 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.52■□□□□ 0.56
Mmp3P28862 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.52■□□□□ 0.56
Mmp3P28862 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
Mmp3P28862 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Mmp3P28862 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Mmp3P28862 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Mmp3P28862 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Mmp3P28862 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Mmp3P28862 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Mmp3P28862 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Mmp3P28862 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Mmp3P28862 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Mmp3P28862 Gm14859-201ENSMUST00000117752 357 ntBASIC18.51■□□□□ 0.55
Mmp3P28862 Gm7284-201ENSMUST00000131667 944 ntBASIC18.51■□□□□ 0.55
Mmp3P28862 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Mmp3P28862 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Mmp3P28862 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Mmp3P28862 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Mmp3P28862 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Mmp3P28862 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Mmp3P28862 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.51■□□□□ 0.55
Mmp3P28862 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Mmp3P28862 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Mmp3P28862 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mmp3P28862 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mmp3P28862 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Mmp3P28862 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mmp3P28862 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC18.5■□□□□ 0.55
Mmp3P28862 Gm11355-201ENSMUST00000121120 306 ntBASIC18.5■□□□□ 0.55
Mmp3P28862 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC18.5■□□□□ 0.55
Mmp3P28862 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mmp3P28862 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC18.5■□□□□ 0.55
Mmp3P28862 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mmp3P28862 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
Mmp3P28862 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Mmp3P28862 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Mmp3P28862 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mmp3P28862 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mmp3P28862 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Mmp3P28862 AC154855.1-201ENSMUST00000227353 1458 ntBASIC18.5■□□□□ 0.55
Mmp3P28862 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mmp3P28862 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mmp3P28862 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms