Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Mir5122-201ENSMUST00000175004 89 ntBASIC15.68■□□□□ 0.1
Cd40P27512 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cd40P27512 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cd40P27512 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cd40P27512 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
Cd40P27512 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cd40P27512 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cd40P27512 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cd40P27512 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Cd40P27512 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cd40P27512 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
Cd40P27512 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC15.67■□□□□ 0.1
Cd40P27512 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cd40P27512 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC15.67■□□□□ 0.1
Cd40P27512 Gm17661-201ENSMUST00000170317 270 ntBASIC15.67■□□□□ 0.1
Cd40P27512 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC15.67■□□□□ 0.1
Cd40P27512 Gm21814-202ENSMUST00000203277 873 ntBASIC15.67■□□□□ 0.1
Cd40P27512 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
Cd40P27512 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC15.67■□□□□ 0.1
Cd40P27512 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cd40P27512 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cd40P27512 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cd40P27512 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cd40P27512 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Cd40P27512 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cd40P27512 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Cd40P27512 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cd40P27512 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cd40P27512 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cd40P27512 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.66■□□□□ 0.1
Cd40P27512 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cd40P27512 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cd40P27512 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Cd40P27512 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cd40P27512 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cd40P27512 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cd40P27512 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cd40P27512 Arhgef4-208ENSMUST00000211073 171 ntBASIC15.66■□□□□ 0.1
Cd40P27512 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC15.66■□□□□ 0.1
Cd40P27512 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Cd40P27512 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC15.66■□□□□ 0.1
Cd40P27512 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Cd40P27512 Gm37519-201ENSMUST00000191687 2210 ntBASIC15.66■□□□□ 0.1
Cd40P27512 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cd40P27512 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cd40P27512 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cd40P27512 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cd40P27512 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cd40P27512 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cd40P27512 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cd40P27512 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cd40P27512 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC15.65■□□□□ 0.1
Cd40P27512 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cd40P27512 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC15.65■□□□□ 0.1
Cd40P27512 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC15.65■□□□□ 0.1
Cd40P27512 Gm3375-201ENSMUST00000203929 796 ntBASIC15.65■□□□□ 0.1
Cd40P27512 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC15.65■□□□□ 0.1
Cd40P27512 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC15.65■□□□□ 0.1
Cd40P27512 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cd40P27512 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Cd40P27512 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cd40P27512 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cd40P27512 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Cd40P27512 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cd40P27512 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Cd40P27512 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Cd40P27512 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cd40P27512 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cd40P27512 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cd40P27512 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cd40P27512 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Cd40P27512 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cd40P27512 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC15.64■□□□□ 0.09
Cd40P27512 Gm9731-201ENSMUST00000209480 747 ntBASIC15.64■□□□□ 0.09
Cd40P27512 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Cd40P27512 Otx2os1-204ENSMUST00000227221 751 ntBASIC15.64■□□□□ 0.09
Cd40P27512 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC15.64■□□□□ 0.09
Cd40P27512 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cd40P27512 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cd40P27512 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cd40P27512 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cd40P27512 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Cd40P27512 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cd40P27512 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cd40P27512 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cd40P27512 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cd40P27512 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cd40P27512 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cd40P27512 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC15.63■□□□□ 0.09
Cd40P27512 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Cd40P27512 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Cd40P27512 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cd40P27512 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cd40P27512 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC15.62■□□□□ 0.09
Cd40P27512 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cd40P27512 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cd40P27512 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC15.62■□□□□ 0.09
Cd40P27512 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cd40P27512 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cd40P27512 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms