Protein–RNA interactions for Protein: P24549

Aldh1a1, Retinal dehydrogenase 1, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aldh1a1P24549 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Aldh1a1P24549 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Aldh1a1P24549 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Aldh1a1P24549 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Aldh1a1P24549 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.54■□□□□ 0.56
Aldh1a1P24549 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.54■□□□□ 0.56
Aldh1a1P24549 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Aldh1a1P24549 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC18.54■□□□□ 0.56
Aldh1a1P24549 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Aldh1a1P24549 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC18.54■□□□□ 0.56
Aldh1a1P24549 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC18.54■□□□□ 0.56
Aldh1a1P24549 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC18.54■□□□□ 0.56
Aldh1a1P24549 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Aldh1a1P24549 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Aldh1a1P24549 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Aldh1a1P24549 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Aldh1a1P24549 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Aldh1a1P24549 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Aldh1a1P24549 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC18.54■□□□□ 0.56
Aldh1a1P24549 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Aldh1a1P24549 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Aldh1a1P24549 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
Aldh1a1P24549 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Aldh1a1P24549 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Aldh1a1P24549 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Aldh1a1P24549 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Aldh1a1P24549 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Aldh1a1P24549 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Aldh1a1P24549 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC18.53■□□□□ 0.56
Aldh1a1P24549 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC18.53■□□□□ 0.56
Aldh1a1P24549 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC18.53■□□□□ 0.56
Aldh1a1P24549 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC18.53■□□□□ 0.56
Aldh1a1P24549 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Aldh1a1P24549 AC153889.1-201ENSMUST00000219257 330 ntBASIC18.53■□□□□ 0.56
Aldh1a1P24549 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Aldh1a1P24549 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Aldh1a1P24549 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Aldh1a1P24549 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.53■□□□□ 0.56
Aldh1a1P24549 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Aldh1a1P24549 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Aldh1a1P24549 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.52■□□□□ 0.56
Aldh1a1P24549 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Aldh1a1P24549 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Aldh1a1P24549 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.52■□□□□ 0.56
Aldh1a1P24549 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Aldh1a1P24549 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Aldh1a1P24549 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Aldh1a1P24549 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
Aldh1a1P24549 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Aldh1a1P24549 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Aldh1a1P24549 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Aldh1a1P24549 Gm25925-201ENSMUST00000158314 306 ntBASIC18.52■□□□□ 0.56
Aldh1a1P24549 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC18.52■□□□□ 0.56
Aldh1a1P24549 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC18.52■□□□□ 0.56
Aldh1a1P24549 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Aldh1a1P24549 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Aldh1a1P24549 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Aldh1a1P24549 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.52■□□□□ 0.55
Aldh1a1P24549 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Aldh1a1P24549 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Aldh1a1P24549 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Aldh1a1P24549 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
Aldh1a1P24549 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Aldh1a1P24549 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Aldh1a1P24549 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Aldh1a1P24549 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Aldh1a1P24549 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Aldh1a1P24549 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Aldh1a1P24549 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Aldh1a1P24549 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Aldh1a1P24549 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Aldh1a1P24549 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Aldh1a1P24549 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Aldh1a1P24549 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Aldh1a1P24549 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Aldh1a1P24549 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Aldh1a1P24549 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC18.5■□□□□ 0.55
Aldh1a1P24549 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC18.5■□□□□ 0.55
Aldh1a1P24549 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC18.5■□□□□ 0.55
Aldh1a1P24549 AW822252-206ENSMUST00000208904 237 ntBASIC18.5■□□□□ 0.55
Aldh1a1P24549 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Aldh1a1P24549 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Aldh1a1P24549 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.5■□□□□ 0.55
Aldh1a1P24549 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Aldh1a1P24549 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.5■□□□□ 0.55
Aldh1a1P24549 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Aldh1a1P24549 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Aldh1a1P24549 Gm10052-201ENSMUST00000168019 960 ntBASIC18.49■□□□□ 0.55
Aldh1a1P24549 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC18.49■□□□□ 0.55
Aldh1a1P24549 Gm7729-201ENSMUST00000050143 801 ntBASIC18.49■□□□□ 0.55
Aldh1a1P24549 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Aldh1a1P24549 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Aldh1a1P24549 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Aldh1a1P24549 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Aldh1a1P24549 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Aldh1a1P24549 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Aldh1a1P24549 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Aldh1a1P24549 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Aldh1a1P24549 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Aldh1a1P24549 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms