Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.72■□□□□ 0.43
Hmga1P17095 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hmga1P17095 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hmga1P17095 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hmga1P17095 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Hmga1P17095 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hmga1P17095 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Hmga1P17095 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Hmga1P17095 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.71■□□□□ 0.43
Hmga1P17095 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
Hmga1P17095 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hmga1P17095 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Hmga1P17095 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.71■□□□□ 0.43
Hmga1P17095 Gm33142-201ENSMUST00000193913 867 ntBASIC17.71■□□□□ 0.43
Hmga1P17095 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hmga1P17095 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hmga1P17095 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hmga1P17095 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.71■□□□□ 0.43
Hmga1P17095 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hmga1P17095 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hmga1P17095 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hmga1P17095 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Hmga1P17095 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.7■□□□□ 0.42
Hmga1P17095 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hmga1P17095 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hmga1P17095 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hmga1P17095 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hmga1P17095 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hmga1P17095 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hmga1P17095 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.7■□□□□ 0.42
Hmga1P17095 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hmga1P17095 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Hmga1P17095 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.7■□□□□ 0.42
Hmga1P17095 Gm25016-201ENSMUST00000158399 131 ntBASIC17.7■□□□□ 0.42
Hmga1P17095 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.7■□□□□ 0.42
Hmga1P17095 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.7■□□□□ 0.42
Hmga1P17095 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.7■□□□□ 0.42
Hmga1P17095 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Hmga1P17095 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hmga1P17095 Gm7367-201ENSMUST00000057611 492 ntBASIC17.7■□□□□ 0.42
Hmga1P17095 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hmga1P17095 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Hmga1P17095 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hmga1P17095 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hmga1P17095 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hmga1P17095 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hmga1P17095 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hmga1P17095 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hmga1P17095 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hmga1P17095 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Hmga1P17095 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.69■□□□□ 0.42
Hmga1P17095 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hmga1P17095 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.69■□□□□ 0.42
Hmga1P17095 Gm26039-201ENSMUST00000158152 144 ntBASIC17.69■□□□□ 0.42
Hmga1P17095 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC17.69■□□□□ 0.42
Hmga1P17095 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.69■□□□□ 0.42
Hmga1P17095 Gm5587-201ENSMUST00000206270 674 ntBASIC17.69■□□□□ 0.42
Hmga1P17095 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Hmga1P17095 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hmga1P17095 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hmga1P17095 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Hmga1P17095 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.69■□□□□ 0.42
Hmga1P17095 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hmga1P17095 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hmga1P17095 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Hmga1P17095 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.68■□□□□ 0.42
Hmga1P17095 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Hmga1P17095 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.68■□□□□ 0.42
Hmga1P17095 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hmga1P17095 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hmga1P17095 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hmga1P17095 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Hmga1P17095 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.68■□□□□ 0.42
Hmga1P17095 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hmga1P17095 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hmga1P17095 Gm10819-201ENSMUST00000099988 561 ntBASIC17.68■□□□□ 0.42
Hmga1P17095 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hmga1P17095 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Hmga1P17095 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hmga1P17095 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hmga1P17095 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Hmga1P17095 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hmga1P17095 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hmga1P17095 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hmga1P17095 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hmga1P17095 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hmga1P17095 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Hmga1P17095 Gm9013-201ENSMUST00000132939 882 ntBASIC17.67■□□□□ 0.42
Hmga1P17095 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hmga1P17095 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.67■□□□□ 0.42
Hmga1P17095 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hmga1P17095 Gm18958-201ENSMUST00000174258 762 ntBASIC17.67■□□□□ 0.42
Hmga1P17095 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Hmga1P17095 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Hmga1P17095 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hmga1P17095 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hmga1P17095 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hmga1P17095 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Hmga1P17095 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.66■□□□□ 0.42
Hmga1P17095 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms