Protein–RNA interactions for Protein: P08553

Nefm, Neurofilament medium polypeptide, mousemouse

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NefmP08553 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
NefmP08553 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
NefmP08553 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
NefmP08553 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
NefmP08553 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
NefmP08553 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
NefmP08553 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
NefmP08553 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
NefmP08553 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC25.6■■□□□ 1.69
NefmP08553 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC25.6■■□□□ 1.69
NefmP08553 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC25.6■■□□□ 1.69
NefmP08553 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
NefmP08553 Rab3c-203ENSMUST00000224180 967 ntBASIC25.6■■□□□ 1.69
NefmP08553 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
NefmP08553 Tfap2a-209ENSMUST00000225180 1828 ntBASIC25.6■■□□□ 1.69
NefmP08553 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
NefmP08553 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
NefmP08553 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC25.59■■□□□ 1.69
NefmP08553 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
NefmP08553 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
NefmP08553 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC25.59■■□□□ 1.69
NefmP08553 Gm13148-201ENSMUST00000118892 745 ntBASIC25.59■■□□□ 1.69
NefmP08553 Mir6349-201ENSMUST00000184059 97 ntBASIC25.59■■□□□ 1.69
NefmP08553 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
NefmP08553 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
NefmP08553 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC25.59■■□□□ 1.69
NefmP08553 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
NefmP08553 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
NefmP08553 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
NefmP08553 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
NefmP08553 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.69
NefmP08553 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
NefmP08553 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
NefmP08553 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
NefmP08553 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
NefmP08553 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
NefmP08553 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
NefmP08553 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
NefmP08553 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
NefmP08553 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
NefmP08553 Gm26571-201ENSMUST00000181399 666 ntBASIC25.58■■□□□ 1.69
NefmP08553 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
NefmP08553 Mtag2-201ENSMUST00000058665 714 ntBASIC25.58■■□□□ 1.69
NefmP08553 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC25.58■■□□□ 1.69
NefmP08553 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
NefmP08553 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
NefmP08553 Gm10654-201ENSMUST00000098653 1633 ntBASIC25.58■■□□□ 1.69
NefmP08553 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
NefmP08553 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
NefmP08553 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
NefmP08553 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC25.57■■□□□ 1.68
NefmP08553 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
NefmP08553 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
NefmP08553 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC25.57■■□□□ 1.68
NefmP08553 Gm37166-201ENSMUST00000195473 2474 ntBASIC25.57■■□□□ 1.68
NefmP08553 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
NefmP08553 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC25.56■■□□□ 1.68
NefmP08553 Gm15847-201ENSMUST00000121417 1065 ntBASIC25.56■■□□□ 1.68
NefmP08553 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
NefmP08553 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC25.56■■□□□ 1.68
NefmP08553 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
NefmP08553 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
NefmP08553 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
NefmP08553 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
NefmP08553 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
NefmP08553 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
NefmP08553 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
NefmP08553 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
NefmP08553 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
NefmP08553 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
NefmP08553 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC25.55■■□□□ 1.68
NefmP08553 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC25.55■■□□□ 1.68
NefmP08553 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
NefmP08553 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
NefmP08553 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
NefmP08553 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
NefmP08553 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
NefmP08553 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC25.55■■□□□ 1.68
NefmP08553 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
NefmP08553 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
NefmP08553 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
NefmP08553 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
NefmP08553 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
NefmP08553 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
NefmP08553 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
NefmP08553 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
NefmP08553 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
NefmP08553 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC25.54■■□□□ 1.68
NefmP08553 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
NefmP08553 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
NefmP08553 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC25.54■■□□□ 1.68
NefmP08553 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
NefmP08553 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
NefmP08553 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC25.54■■□□□ 1.68
NefmP08553 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
NefmP08553 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC25.53■■□□□ 1.68
NefmP08553 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
NefmP08553 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC25.53■■□□□ 1.68
NefmP08553 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC25.53■■□□□ 1.68
NefmP08553 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC25.53■■□□□ 1.68
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms