Protein–RNA interactions for Protein: P04441

Cd74, H-2 class II histocompatibility antigen gamma chain, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd74P04441 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cd74P04441 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC14.56□□□□□ -0.08
Cd74P04441 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC14.56□□□□□ -0.08
Cd74P04441 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Cd74P04441 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cd74P04441 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Cd74P04441 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cd74P04441 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cd74P04441 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cd74P04441 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cd74P04441 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cd74P04441 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cd74P04441 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cd74P04441 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cd74P04441 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cd74P04441 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cd74P04441 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cd74P04441 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC14.56□□□□□ -0.08
Cd74P04441 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cd74P04441 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cd74P04441 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cd74P04441 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cd74P04441 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cd74P04441 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC14.55□□□□□ -0.08
Cd74P04441 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cd74P04441 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cd74P04441 Gm11927-201ENSMUST00000118472 759 ntBASIC14.55□□□□□ -0.08
Cd74P04441 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC14.55□□□□□ -0.08
Cd74P04441 Mir7071-201ENSMUST00000184847 69 ntBASIC14.55□□□□□ -0.08
Cd74P04441 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cd74P04441 AC163280.1-201ENSMUST00000228194 1100 ntBASIC14.55□□□□□ -0.08
Cd74P04441 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cd74P04441 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cd74P04441 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cd74P04441 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cd74P04441 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Cd74P04441 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cd74P04441 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Cd74P04441 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cd74P04441 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Cd74P04441 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cd74P04441 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cd74P04441 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cd74P04441 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cd74P04441 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cd74P04441 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cd74P04441 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Cd74P04441 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cd74P04441 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cd74P04441 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cd74P04441 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cd74P04441 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cd74P04441 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cd74P04441 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC14.54□□□□□ -0.08
Cd74P04441 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Cd74P04441 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cd74P04441 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC14.54□□□□□ -0.08
Cd74P04441 Gm8969-201ENSMUST00000199694 526 ntBASIC14.54□□□□□ -0.08
Cd74P04441 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cd74P04441 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cd74P04441 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cd74P04441 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cd74P04441 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC14.54□□□□□ -0.08
Cd74P04441 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cd74P04441 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cd74P04441 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cd74P04441 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cd74P04441 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cd74P04441 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cd74P04441 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Cd74P04441 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Cd74P04441 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.54□□□□□ -0.08
Cd74P04441 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cd74P04441 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cd74P04441 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cd74P04441 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cd74P04441 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cd74P04441 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cd74P04441 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cd74P04441 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cd74P04441 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cd74P04441 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cd74P04441 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cd74P04441 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Cd74P04441 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cd74P04441 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cd74P04441 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cd74P04441 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC14.53□□□□□ -0.08
Cd74P04441 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC14.53□□□□□ -0.08
Cd74P04441 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cd74P04441 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cd74P04441 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cd74P04441 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cd74P04441 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cd74P04441 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cd74P04441 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cd74P04441 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Cd74P04441 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cd74P04441 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cd74P04441 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms