Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
P04224 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
P04224 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
P04224 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC15.25■□□□□ 0.03
P04224 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
P04224 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC15.25■□□□□ 0.03
P04224 Gm43060-201ENSMUST00000200621 289 ntBASIC15.25■□□□□ 0.03
P04224 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
P04224 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC15.25■□□□□ 0.03
P04224 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC15.25■□□□□ 0.03
P04224 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
P04224 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
P04224 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
P04224 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
P04224 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
P04224 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.25■□□□□ 0.03
P04224 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
P04224 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
P04224 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
P04224 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
P04224 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC15.24■□□□□ 0.03
P04224 Tgds-204ENSMUST00000228543 1594 ntBASIC15.24■□□□□ 0.03
P04224 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
P04224 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
P04224 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
P04224 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
P04224 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
P04224 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC15.24■□□□□ 0.03
P04224 AC107452.1-201ENSMUST00000227963 481 ntBASIC15.24■□□□□ 0.03
P04224 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
P04224 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
P04224 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
P04224 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
P04224 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
P04224 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
P04224 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
P04224 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
P04224 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
P04224 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
P04224 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
P04224 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
P04224 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
P04224 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
P04224 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
P04224 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
P04224 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
P04224 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
P04224 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
P04224 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC15.23■□□□□ 0.03
P04224 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
P04224 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
P04224 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
P04224 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
P04224 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
P04224 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
P04224 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
P04224 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
P04224 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
P04224 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
P04224 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
P04224 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
P04224 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
P04224 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
P04224 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC15.22■□□□□ 0.03
P04224 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
P04224 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
P04224 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC15.22■□□□□ 0.03
P04224 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
P04224 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
P04224 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
P04224 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
P04224 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
P04224 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
P04224 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
P04224 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.22■□□□□ 0.03
P04224 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
P04224 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
P04224 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC15.21■□□□□ 0.03
P04224 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
P04224 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
P04224 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
P04224 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
P04224 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
P04224 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
P04224 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
P04224 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
P04224 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
P04224 Gm9988-201ENSMUST00000069786 435 ntBASIC15.21■□□□□ 0.03
P04224 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
P04224 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
P04224 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
P04224 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
P04224 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
P04224 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
P04224 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
P04224 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
P04224 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
P04224 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
P04224 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
P04224 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC15.21■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms