Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vti1aO89116 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Vti1aO89116 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.68■□□□□ 0.58
Vti1aO89116 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Vti1aO89116 Gm38027-201ENSMUST00000192315 235 ntBASIC18.68■□□□□ 0.58
Vti1aO89116 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Vti1aO89116 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC18.68■□□□□ 0.58
Vti1aO89116 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vti1aO89116 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Vti1aO89116 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Vti1aO89116 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.68■□□□□ 0.58
Vti1aO89116 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Vti1aO89116 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vti1aO89116 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Vti1aO89116 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Vti1aO89116 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Vti1aO89116 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vti1aO89116 Gm10013-201ENSMUST00000106074 672 ntBASIC18.67■□□□□ 0.58
Vti1aO89116 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
Vti1aO89116 Gm6728-201ENSMUST00000178117 1065 ntBASIC18.67■□□□□ 0.58
Vti1aO89116 Gm45058-201ENSMUST00000205810 766 ntBASIC18.67■□□□□ 0.58
Vti1aO89116 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC18.67■□□□□ 0.58
Vti1aO89116 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vti1aO89116 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Vti1aO89116 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vti1aO89116 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vti1aO89116 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
Vti1aO89116 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vti1aO89116 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vti1aO89116 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Vti1aO89116 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vti1aO89116 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.66■□□□□ 0.58
Vti1aO89116 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Vti1aO89116 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vti1aO89116 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.66■□□□□ 0.58
Vti1aO89116 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Vti1aO89116 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Vti1aO89116 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vti1aO89116 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.66■□□□□ 0.58
Vti1aO89116 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.66■□□□□ 0.58
Vti1aO89116 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vti1aO89116 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Vti1aO89116 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Vti1aO89116 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC18.66■□□□□ 0.58
Vti1aO89116 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Vti1aO89116 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Vti1aO89116 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vti1aO89116 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vti1aO89116 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Vti1aO89116 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vti1aO89116 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vti1aO89116 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vti1aO89116 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vti1aO89116 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Vti1aO89116 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Vti1aO89116 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.65■□□□□ 0.58
Vti1aO89116 Gm10459-201ENSMUST00000202708 1155 ntBASIC18.65■□□□□ 0.58
Vti1aO89116 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vti1aO89116 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vti1aO89116 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vti1aO89116 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vti1aO89116 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Vti1aO89116 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.64■□□□□ 0.58
Vti1aO89116 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Vti1aO89116 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Vti1aO89116 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Vti1aO89116 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Vti1aO89116 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC18.64■□□□□ 0.57
Vti1aO89116 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.64■□□□□ 0.57
Vti1aO89116 Gm4974-201ENSMUST00000209974 875 ntBASIC18.64■□□□□ 0.57
Vti1aO89116 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.64■□□□□ 0.57
Vti1aO89116 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vti1aO89116 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vti1aO89116 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vti1aO89116 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.64■□□□□ 0.57
Vti1aO89116 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vti1aO89116 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.64■□□□□ 0.57
Vti1aO89116 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Vti1aO89116 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vti1aO89116 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vti1aO89116 AA414768-201ENSMUST00000121924 1257 ntBASIC18.63■□□□□ 0.57
Vti1aO89116 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Vti1aO89116 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vti1aO89116 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Vti1aO89116 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Vti1aO89116 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vti1aO89116 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vti1aO89116 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Vti1aO89116 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Vti1aO89116 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vti1aO89116 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Vti1aO89116 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Vti1aO89116 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Vti1aO89116 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
Vti1aO89116 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Vti1aO89116 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vti1aO89116 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Vti1aO89116 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
Vti1aO89116 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vti1aO89116 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms