Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sh2d1aO88890 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sh2d1aO88890 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sh2d1aO88890 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sh2d1aO88890 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC12.27□□□□□ -0.45
Sh2d1aO88890 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sh2d1aO88890 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sh2d1aO88890 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sh2d1aO88890 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sh2d1aO88890 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sh2d1aO88890 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sh2d1aO88890 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sh2d1aO88890 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sh2d1aO88890 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sh2d1aO88890 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC12.27□□□□□ -0.45
Sh2d1aO88890 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Sh2d1aO88890 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sh2d1aO88890 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sh2d1aO88890 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sh2d1aO88890 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sh2d1aO88890 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sh2d1aO88890 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sh2d1aO88890 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sh2d1aO88890 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sh2d1aO88890 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sh2d1aO88890 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sh2d1aO88890 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sh2d1aO88890 Gm11927-201ENSMUST00000118472 759 ntBASIC12.26□□□□□ -0.45
Sh2d1aO88890 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC12.26□□□□□ -0.45
Sh2d1aO88890 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sh2d1aO88890 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Sh2d1aO88890 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sh2d1aO88890 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sh2d1aO88890 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sh2d1aO88890 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Sh2d1aO88890 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC12.26□□□□□ -0.45
Sh2d1aO88890 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sh2d1aO88890 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sh2d1aO88890 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sh2d1aO88890 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sh2d1aO88890 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sh2d1aO88890 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Sh2d1aO88890 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Sh2d1aO88890 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sh2d1aO88890 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sh2d1aO88890 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sh2d1aO88890 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sh2d1aO88890 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sh2d1aO88890 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sh2d1aO88890 Gm12896-201ENSMUST00000118430 226 ntBASIC12.25□□□□□ -0.45
Sh2d1aO88890 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC12.25□□□□□ -0.45
Sh2d1aO88890 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC12.25□□□□□ -0.45
Sh2d1aO88890 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC12.25□□□□□ -0.45
Sh2d1aO88890 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sh2d1aO88890 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC12.25□□□□□ -0.45
Sh2d1aO88890 Gm4968-201ENSMUST00000071458 858 ntBASIC12.25□□□□□ -0.45
Sh2d1aO88890 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sh2d1aO88890 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sh2d1aO88890 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sh2d1aO88890 AC108858.1-201ENSMUST00000228461 1498 ntBASIC12.25□□□□□ -0.45
Sh2d1aO88890 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sh2d1aO88890 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC12.25□□□□□ -0.45
Sh2d1aO88890 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sh2d1aO88890 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sh2d1aO88890 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
Sh2d1aO88890 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sh2d1aO88890 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sh2d1aO88890 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sh2d1aO88890 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sh2d1aO88890 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sh2d1aO88890 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sh2d1aO88890 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Sh2d1aO88890 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sh2d1aO88890 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sh2d1aO88890 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
Sh2d1aO88890 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sh2d1aO88890 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC12.24□□□□□ -0.45
Sh2d1aO88890 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Sh2d1aO88890 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC12.24□□□□□ -0.45
Sh2d1aO88890 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sh2d1aO88890 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sh2d1aO88890 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sh2d1aO88890 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Sh2d1aO88890 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sh2d1aO88890 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sh2d1aO88890 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC12.24□□□□□ -0.45
Sh2d1aO88890 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sh2d1aO88890 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Sh2d1aO88890 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC12.24□□□□□ -0.45
Sh2d1aO88890 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sh2d1aO88890 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sh2d1aO88890 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sh2d1aO88890 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sh2d1aO88890 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sh2d1aO88890 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sh2d1aO88890 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC12.23□□□□□ -0.45
Sh2d1aO88890 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sh2d1aO88890 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sh2d1aO88890 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sh2d1aO88890 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms