Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Gm21559-201ENSMUST00000220638 855 ntBASIC16.65■□□□□ 0.26
Best1O88870 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Best1O88870 Gm8587-201ENSMUST00000076538 843 ntBASIC16.65■□□□□ 0.26
Best1O88870 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Best1O88870 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Best1O88870 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Best1O88870 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Best1O88870 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Best1O88870 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.64■□□□□ 0.25
Best1O88870 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Best1O88870 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.64■□□□□ 0.25
Best1O88870 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Best1O88870 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Best1O88870 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Best1O88870 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Best1O88870 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.64■□□□□ 0.25
Best1O88870 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Best1O88870 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Best1O88870 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Best1O88870 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
Best1O88870 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Best1O88870 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.64■□□□□ 0.25
Best1O88870 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Best1O88870 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Best1O88870 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Best1O88870 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Best1O88870 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Best1O88870 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Best1O88870 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Best1O88870 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Best1O88870 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Best1O88870 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Best1O88870 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Best1O88870 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Best1O88870 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Best1O88870 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.63■□□□□ 0.25
Best1O88870 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Best1O88870 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Best1O88870 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.63■□□□□ 0.25
Best1O88870 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Best1O88870 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.63■□□□□ 0.25
Best1O88870 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.63■□□□□ 0.25
Best1O88870 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Best1O88870 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Best1O88870 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Best1O88870 Grk6-206ENSMUST00000224995 2971 ntBASIC16.62■□□□□ 0.25
Best1O88870 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Best1O88870 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
Best1O88870 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Best1O88870 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Best1O88870 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Best1O88870 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Best1O88870 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Best1O88870 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Best1O88870 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Best1O88870 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Best1O88870 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Best1O88870 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Best1O88870 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Best1O88870 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Best1O88870 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Best1O88870 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Best1O88870 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Best1O88870 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Best1O88870 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Best1O88870 AA414768-201ENSMUST00000121924 1257 ntBASIC16.61■□□□□ 0.25
Best1O88870 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.61■□□□□ 0.25
Best1O88870 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Best1O88870 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Best1O88870 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Best1O88870 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Best1O88870 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Best1O88870 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Best1O88870 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Best1O88870 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Best1O88870 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Best1O88870 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Best1O88870 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Best1O88870 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Best1O88870 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Best1O88870 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Best1O88870 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Best1O88870 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Best1O88870 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Best1O88870 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Best1O88870 Actl10-202ENSMUST00000226583 1501 ntBASIC16.6■□□□□ 0.25
Best1O88870 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Best1O88870 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Best1O88870 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Best1O88870 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Best1O88870 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Best1O88870 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Best1O88870 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Best1O88870 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Best1O88870 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.6■□□□□ 0.25
Best1O88870 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Best1O88870 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Best1O88870 Gm25016-201ENSMUST00000158399 131 ntBASIC16.6■□□□□ 0.25
Best1O88870 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Best1O88870 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms