Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Hcn1O88704 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hcn1O88704 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hcn1O88704 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Hcn1O88704 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.57■□□□□ 0.24
Hcn1O88704 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Hcn1O88704 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Hcn1O88704 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.57■□□□□ 0.24
Hcn1O88704 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Hcn1O88704 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC16.57■□□□□ 0.24
Hcn1O88704 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Hcn1O88704 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.57■□□□□ 0.24
Hcn1O88704 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.57■□□□□ 0.24
Hcn1O88704 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Hcn1O88704 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hcn1O88704 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hcn1O88704 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Hcn1O88704 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Hcn1O88704 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hcn1O88704 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Hcn1O88704 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hcn1O88704 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hcn1O88704 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hcn1O88704 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hcn1O88704 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hcn1O88704 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hcn1O88704 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hcn1O88704 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hcn1O88704 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hcn1O88704 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hcn1O88704 Gm10812-201ENSMUST00000099864 546 ntBASIC16.56■□□□□ 0.24
Hcn1O88704 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.56■□□□□ 0.24
Hcn1O88704 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Hcn1O88704 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hcn1O88704 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.56■□□□□ 0.24
Hcn1O88704 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hcn1O88704 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Hcn1O88704 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hcn1O88704 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hcn1O88704 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hcn1O88704 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hcn1O88704 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hcn1O88704 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hcn1O88704 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hcn1O88704 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Hcn1O88704 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hcn1O88704 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hcn1O88704 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.55■□□□□ 0.24
Hcn1O88704 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.55■□□□□ 0.24
Hcn1O88704 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hcn1O88704 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hcn1O88704 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Hcn1O88704 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hcn1O88704 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Hcn1O88704 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hcn1O88704 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Hcn1O88704 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hcn1O88704 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hcn1O88704 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hcn1O88704 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hcn1O88704 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Hcn1O88704 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hcn1O88704 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Hcn1O88704 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Hcn1O88704 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.54■□□□□ 0.24
Hcn1O88704 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.54■□□□□ 0.24
Hcn1O88704 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16.54■□□□□ 0.24
Hcn1O88704 Gm10138-203ENSMUST00000206952 366 ntBASIC16.54■□□□□ 0.24
Hcn1O88704 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.54■□□□□ 0.24
Hcn1O88704 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC16.54■□□□□ 0.24
Hcn1O88704 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Hcn1O88704 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Hcn1O88704 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
Hcn1O88704 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hcn1O88704 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hcn1O88704 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hcn1O88704 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC16.54■□□□□ 0.24
Hcn1O88704 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.54■□□□□ 0.24
Hcn1O88704 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hcn1O88704 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hcn1O88704 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.53■□□□□ 0.24
Hcn1O88704 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hcn1O88704 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hcn1O88704 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hcn1O88704 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Hcn1O88704 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Hcn1O88704 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Hcn1O88704 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.53■□□□□ 0.24
Hcn1O88704 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Hcn1O88704 Gm10698-201ENSMUST00000182663 604 ntBASIC16.53■□□□□ 0.24
Hcn1O88704 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC16.53■□□□□ 0.24
Hcn1O88704 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.53■□□□□ 0.24
Hcn1O88704 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hcn1O88704 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Hcn1O88704 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hcn1O88704 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hcn1O88704 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hcn1O88704 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hcn1O88704 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hcn1O88704 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms