Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cops6O88545 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cops6O88545 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Cops6O88545 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Cops6O88545 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cops6O88545 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC21.15■□□□□ 0.98
Cops6O88545 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Cops6O88545 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC21.15■□□□□ 0.98
Cops6O88545 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
Cops6O88545 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Cops6O88545 Gm27741-201ENSMUST00000185060 237 ntBASIC21.15■□□□□ 0.98
Cops6O88545 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cops6O88545 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cops6O88545 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cops6O88545 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Cops6O88545 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC21.15■□□□□ 0.98
Cops6O88545 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cops6O88545 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Cops6O88545 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
Cops6O88545 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Cops6O88545 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Cops6O88545 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Cops6O88545 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Cops6O88545 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC21.14■□□□□ 0.98
Cops6O88545 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Cops6O88545 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Cops6O88545 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Cops6O88545 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Cops6O88545 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cops6O88545 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cops6O88545 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Cops6O88545 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Cops6O88545 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cops6O88545 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cops6O88545 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cops6O88545 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cops6O88545 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cops6O88545 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cops6O88545 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cops6O88545 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cops6O88545 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC21.13■□□□□ 0.97
Cops6O88545 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC21.13■□□□□ 0.97
Cops6O88545 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Cops6O88545 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cops6O88545 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Cops6O88545 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC21.13■□□□□ 0.97
Cops6O88545 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC21.13■□□□□ 0.97
Cops6O88545 Gm37722-201ENSMUST00000193757 208 ntBASIC21.13■□□□□ 0.97
Cops6O88545 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cops6O88545 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cops6O88545 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Cops6O88545 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC21.13■□□□□ 0.97
Cops6O88545 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cops6O88545 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cops6O88545 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC21.13■□□□□ 0.97
Cops6O88545 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Cops6O88545 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Cops6O88545 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cops6O88545 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cops6O88545 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Cops6O88545 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cops6O88545 Gm5828-201ENSMUST00000071842 1860 ntBASIC21.12■□□□□ 0.97
Cops6O88545 Gm11950-201ENSMUST00000121615 838 ntBASIC21.12■□□□□ 0.97
Cops6O88545 Gm11860-201ENSMUST00000122346 1010 ntBASIC21.12■□□□□ 0.97
Cops6O88545 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC21.12■□□□□ 0.97
Cops6O88545 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cops6O88545 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cops6O88545 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cops6O88545 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cops6O88545 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cops6O88545 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cops6O88545 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cops6O88545 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cops6O88545 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Cops6O88545 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cops6O88545 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cops6O88545 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Cops6O88545 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cops6O88545 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Cops6O88545 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cops6O88545 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cops6O88545 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC21.11■□□□□ 0.97
Cops6O88545 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Cops6O88545 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Cops6O88545 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cops6O88545 AC125311.2-201ENSMUST00000227477 1940 ntBASIC21.1■□□□□ 0.97
Cops6O88545 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cops6O88545 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Cops6O88545 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Cops6O88545 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Cops6O88545 AC159205.3-201ENSMUST00000224614 874 ntBASIC21.1■□□□□ 0.97
Cops6O88545 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cops6O88545 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cops6O88545 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Cops6O88545 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Cops6O88545 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Cops6O88545 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Cops6O88545 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cops6O88545 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Cops6O88545 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms