Protein–RNA interactions for Protein: O88410

Cxcr3, C-X-C chemokine receptor type 3, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr3O88410 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cxcr3O88410 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cxcr3O88410 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cxcr3O88410 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cxcr3O88410 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cxcr3O88410 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cxcr3O88410 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Cxcr3O88410 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.4■□□□□ 0.38
Cxcr3O88410 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cxcr3O88410 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cxcr3O88410 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cxcr3O88410 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cxcr3O88410 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cxcr3O88410 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cxcr3O88410 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.4■□□□□ 0.38
Cxcr3O88410 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
Cxcr3O88410 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cxcr3O88410 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cxcr3O88410 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cxcr3O88410 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Cxcr3O88410 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cxcr3O88410 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cxcr3O88410 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cxcr3O88410 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cxcr3O88410 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cxcr3O88410 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Cxcr3O88410 Gm3375-201ENSMUST00000203929 796 ntBASIC17.39■□□□□ 0.37
Cxcr3O88410 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cxcr3O88410 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cxcr3O88410 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cxcr3O88410 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cxcr3O88410 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Cxcr3O88410 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cxcr3O88410 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.38■□□□□ 0.37
Cxcr3O88410 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cxcr3O88410 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cxcr3O88410 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cxcr3O88410 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.38■□□□□ 0.37
Cxcr3O88410 Gm10231-201ENSMUST00000181584 441 ntBASIC17.38■□□□□ 0.37
Cxcr3O88410 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cxcr3O88410 Gm38027-201ENSMUST00000192315 235 ntBASIC17.38■□□□□ 0.37
Cxcr3O88410 Gm10175-202ENSMUST00000208752 441 ntBASIC17.38■□□□□ 0.37
Cxcr3O88410 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.38■□□□□ 0.37
Cxcr3O88410 Gm30025-201ENSMUST00000218555 728 ntBASIC17.38■□□□□ 0.37
Cxcr3O88410 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cxcr3O88410 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cxcr3O88410 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cxcr3O88410 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cxcr3O88410 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cxcr3O88410 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
Cxcr3O88410 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.38■□□□□ 0.37
Cxcr3O88410 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cxcr3O88410 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Cxcr3O88410 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cxcr3O88410 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Cxcr3O88410 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cxcr3O88410 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.37■□□□□ 0.37
Cxcr3O88410 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cxcr3O88410 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cxcr3O88410 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Cxcr3O88410 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cxcr3O88410 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cxcr3O88410 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cxcr3O88410 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.37■□□□□ 0.37
Cxcr3O88410 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Cxcr3O88410 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cxcr3O88410 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cxcr3O88410 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cxcr3O88410 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Cxcr3O88410 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cxcr3O88410 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Cxcr3O88410 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cxcr3O88410 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cxcr3O88410 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cxcr3O88410 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cxcr3O88410 Gm8969-201ENSMUST00000199694 526 ntBASIC17.36■□□□□ 0.37
Cxcr3O88410 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.36■□□□□ 0.37
Cxcr3O88410 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cxcr3O88410 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cxcr3O88410 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cxcr3O88410 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cxcr3O88410 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cxcr3O88410 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cxcr3O88410 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cxcr3O88410 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cxcr3O88410 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cxcr3O88410 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cxcr3O88410 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cxcr3O88410 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cxcr3O88410 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cxcr3O88410 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Cxcr3O88410 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Cxcr3O88410 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.35■□□□□ 0.37
Cxcr3O88410 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.35■□□□□ 0.37
Cxcr3O88410 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cxcr3O88410 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cxcr3O88410 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cxcr3O88410 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cxcr3O88410 Rarb-207ENSMUST00000225921 2756 ntBASIC17.35■□□□□ 0.37
Cxcr3O88410 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms