Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pdlim1O70400 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Pdlim1O70400 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pdlim1O70400 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pdlim1O70400 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Pdlim1O70400 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.09■□□□□ 0.33
Pdlim1O70400 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pdlim1O70400 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Pdlim1O70400 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Pdlim1O70400 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Pdlim1O70400 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pdlim1O70400 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pdlim1O70400 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.08■□□□□ 0.32
Pdlim1O70400 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pdlim1O70400 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.08■□□□□ 0.32
Pdlim1O70400 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.08■□□□□ 0.32
Pdlim1O70400 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pdlim1O70400 Gm27463-201ENSMUST00000183569 57 ntBASIC17.08■□□□□ 0.32
Pdlim1O70400 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.08■□□□□ 0.32
Pdlim1O70400 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pdlim1O70400 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.08■□□□□ 0.32
Pdlim1O70400 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.08■□□□□ 0.32
Pdlim1O70400 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pdlim1O70400 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.08■□□□□ 0.32
Pdlim1O70400 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Pdlim1O70400 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.08■□□□□ 0.32
Pdlim1O70400 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pdlim1O70400 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pdlim1O70400 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pdlim1O70400 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pdlim1O70400 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pdlim1O70400 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.08■□□□□ 0.32
Pdlim1O70400 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Pdlim1O70400 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pdlim1O70400 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.07■□□□□ 0.32
Pdlim1O70400 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pdlim1O70400 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pdlim1O70400 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pdlim1O70400 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pdlim1O70400 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pdlim1O70400 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pdlim1O70400 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Pdlim1O70400 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Pdlim1O70400 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pdlim1O70400 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pdlim1O70400 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Pdlim1O70400 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.06■□□□□ 0.32
Pdlim1O70400 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pdlim1O70400 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.06■□□□□ 0.32
Pdlim1O70400 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pdlim1O70400 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pdlim1O70400 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Pdlim1O70400 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.06■□□□□ 0.32
Pdlim1O70400 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.06■□□□□ 0.32
Pdlim1O70400 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pdlim1O70400 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pdlim1O70400 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pdlim1O70400 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pdlim1O70400 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
Pdlim1O70400 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pdlim1O70400 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pdlim1O70400 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pdlim1O70400 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pdlim1O70400 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
Pdlim1O70400 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pdlim1O70400 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pdlim1O70400 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pdlim1O70400 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.05■□□□□ 0.32
Pdlim1O70400 Gm30025-201ENSMUST00000218555 728 ntBASIC17.05■□□□□ 0.32
Pdlim1O70400 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pdlim1O70400 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pdlim1O70400 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pdlim1O70400 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pdlim1O70400 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pdlim1O70400 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Pdlim1O70400 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pdlim1O70400 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pdlim1O70400 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pdlim1O70400 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pdlim1O70400 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pdlim1O70400 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.04■□□□□ 0.32
Pdlim1O70400 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.04■□□□□ 0.32
Pdlim1O70400 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pdlim1O70400 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.04■□□□□ 0.32
Pdlim1O70400 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pdlim1O70400 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Pdlim1O70400 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pdlim1O70400 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.04■□□□□ 0.32
Pdlim1O70400 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pdlim1O70400 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pdlim1O70400 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Pdlim1O70400 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pdlim1O70400 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pdlim1O70400 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pdlim1O70400 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pdlim1O70400 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pdlim1O70400 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pdlim1O70400 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pdlim1O70400 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pdlim1O70400 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms