Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Trdmt1O55055 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
Trdmt1O55055 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trdmt1O55055 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.08■□□□□ 0.65
Trdmt1O55055 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trdmt1O55055 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trdmt1O55055 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
Trdmt1O55055 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC19.08■□□□□ 0.64
Trdmt1O55055 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Trdmt1O55055 Olfr129-201ENSMUST00000122318 993 ntBASIC19.08■□□□□ 0.64
Trdmt1O55055 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trdmt1O55055 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC19.08■□□□□ 0.64
Trdmt1O55055 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Trdmt1O55055 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trdmt1O55055 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trdmt1O55055 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trdmt1O55055 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trdmt1O55055 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trdmt1O55055 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trdmt1O55055 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trdmt1O55055 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC19.07■□□□□ 0.64
Trdmt1O55055 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trdmt1O55055 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trdmt1O55055 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trdmt1O55055 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trdmt1O55055 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Trdmt1O55055 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trdmt1O55055 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC19.07■□□□□ 0.64
Trdmt1O55055 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trdmt1O55055 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trdmt1O55055 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trdmt1O55055 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trdmt1O55055 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trdmt1O55055 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trdmt1O55055 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trdmt1O55055 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trdmt1O55055 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trdmt1O55055 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trdmt1O55055 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trdmt1O55055 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trdmt1O55055 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trdmt1O55055 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trdmt1O55055 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trdmt1O55055 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC19.06■□□□□ 0.64
Trdmt1O55055 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC19.06■□□□□ 0.64
Trdmt1O55055 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trdmt1O55055 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trdmt1O55055 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trdmt1O55055 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trdmt1O55055 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.06■□□□□ 0.64
Trdmt1O55055 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trdmt1O55055 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trdmt1O55055 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trdmt1O55055 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trdmt1O55055 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.05■□□□□ 0.64
Trdmt1O55055 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trdmt1O55055 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trdmt1O55055 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trdmt1O55055 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trdmt1O55055 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trdmt1O55055 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trdmt1O55055 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trdmt1O55055 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trdmt1O55055 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trdmt1O55055 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trdmt1O55055 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trdmt1O55055 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trdmt1O55055 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trdmt1O55055 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trdmt1O55055 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.04■□□□□ 0.64
Trdmt1O55055 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trdmt1O55055 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC19.04■□□□□ 0.64
Trdmt1O55055 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trdmt1O55055 Ighv6-1-201ENSMUST00000193612 343 ntBASIC19.04■□□□□ 0.64
Trdmt1O55055 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Trdmt1O55055 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC19.04■□□□□ 0.64
Trdmt1O55055 Gm18115-201ENSMUST00000221209 621 ntBASIC19.04■□□□□ 0.64
Trdmt1O55055 AC133598.3-202ENSMUST00000224219 531 ntBASIC19.04■□□□□ 0.64
Trdmt1O55055 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trdmt1O55055 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trdmt1O55055 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trdmt1O55055 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trdmt1O55055 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.04■□□□□ 0.64
Trdmt1O55055 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trdmt1O55055 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.04■□□□□ 0.64
Trdmt1O55055 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Trdmt1O55055 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trdmt1O55055 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trdmt1O55055 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC19.03■□□□□ 0.64
Trdmt1O55055 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trdmt1O55055 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trdmt1O55055 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trdmt1O55055 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trdmt1O55055 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trdmt1O55055 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trdmt1O55055 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Trdmt1O55055 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Trdmt1O55055 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trdmt1O55055 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trdmt1O55055 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms