Protein–RNA interactions for Protein: O54991

Cntnap1, Contactin-associated protein 1, mousemouse

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap1O54991 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Cntnap1O54991 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
Cntnap1O54991 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Cntnap1O54991 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Cntnap1O54991 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC22.44■■□□□ 1.18
Cntnap1O54991 Gm27628-201ENSMUST00000184911 107 ntBASIC22.44■■□□□ 1.18
Cntnap1O54991 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Cntnap1O54991 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Cntnap1O54991 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC22.44■■□□□ 1.18
Cntnap1O54991 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Cntnap1O54991 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Cntnap1O54991 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Cntnap1O54991 Gm44872-201ENSMUST00000207864 420 ntBASIC22.43■■□□□ 1.18
Cntnap1O54991 Rbfox2-207ENSMUST00000227533 1041 ntBASIC22.43■■□□□ 1.18
Cntnap1O54991 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Cntnap1O54991 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Cntnap1O54991 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Cntnap1O54991 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Cntnap1O54991 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
Cntnap1O54991 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Cntnap1O54991 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC22.42■■□□□ 1.18
Cntnap1O54991 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Cntnap1O54991 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Cntnap1O54991 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC22.42■■□□□ 1.18
Cntnap1O54991 Gm4535-201ENSMUST00000182274 558 ntBASIC22.42■■□□□ 1.18
Cntnap1O54991 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Cntnap1O54991 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
Cntnap1O54991 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
Cntnap1O54991 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Cntnap1O54991 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Cntnap1O54991 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
Cntnap1O54991 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Cntnap1O54991 Gm10355-201ENSMUST00000097146 517 ntBASIC22.42■■□□□ 1.18
Cntnap1O54991 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
Cntnap1O54991 AC122901.1-201ENSMUST00000214203 1790 ntBASIC22.42■■□□□ 1.18
Cntnap1O54991 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
Cntnap1O54991 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Cntnap1O54991 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Cntnap1O54991 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Cntnap1O54991 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Cntnap1O54991 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Cntnap1O54991 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Cntnap1O54991 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Cntnap1O54991 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Cntnap1O54991 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC22.41■■□□□ 1.18
Cntnap1O54991 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
Cntnap1O54991 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Cntnap1O54991 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Cntnap1O54991 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
Cntnap1O54991 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Cntnap1O54991 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Cntnap1O54991 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Cntnap1O54991 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Cntnap1O54991 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Cntnap1O54991 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Cntnap1O54991 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
Cntnap1O54991 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Cntnap1O54991 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Cntnap1O54991 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Cntnap1O54991 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Cntnap1O54991 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
Cntnap1O54991 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC22.41■■□□□ 1.18
Cntnap1O54991 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Cntnap1O54991 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Cntnap1O54991 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC22.4■■□□□ 1.18
Cntnap1O54991 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Cntnap1O54991 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Cntnap1O54991 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Cntnap1O54991 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Cntnap1O54991 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Cntnap1O54991 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC22.4■■□□□ 1.18
Cntnap1O54991 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
Cntnap1O54991 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC22.4■■□□□ 1.18
Cntnap1O54991 Gm13036-201ENSMUST00000117799 748 ntBASIC22.39■■□□□ 1.18
Cntnap1O54991 H2af-ps-201ENSMUST00000119066 295 ntBASIC22.39■■□□□ 1.18
Cntnap1O54991 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Cntnap1O54991 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC22.39■■□□□ 1.18
Cntnap1O54991 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC22.39■■□□□ 1.18
Cntnap1O54991 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Cntnap1O54991 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Cntnap1O54991 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Cntnap1O54991 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Cntnap1O54991 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Cntnap1O54991 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Cntnap1O54991 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Cntnap1O54991 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
Cntnap1O54991 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Cntnap1O54991 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
Cntnap1O54991 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Cntnap1O54991 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
Cntnap1O54991 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC22.38■■□□□ 1.17
Cntnap1O54991 Gm6550-201ENSMUST00000187574 993 ntBASIC22.38■■□□□ 1.17
Cntnap1O54991 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Cntnap1O54991 Phf7-203ENSMUST00000226565 1971 ntBASIC22.38■■□□□ 1.17
Cntnap1O54991 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
Cntnap1O54991 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC22.38■■□□□ 1.17
Cntnap1O54991 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Cntnap1O54991 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Cntnap1O54991 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Cntnap1O54991 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms