Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC19.11■□□□□ 0.65
Prom1O54990 AC133598.3-202ENSMUST00000224219 531 ntBASIC19.11■□□□□ 0.65
Prom1O54990 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Prom1O54990 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC19.11■□□□□ 0.65
Prom1O54990 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Prom1O54990 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Prom1O54990 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.11■□□□□ 0.65
Prom1O54990 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Prom1O54990 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
Prom1O54990 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Prom1O54990 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Prom1O54990 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC19.1■□□□□ 0.65
Prom1O54990 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC19.1■□□□□ 0.65
Prom1O54990 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC19.1■□□□□ 0.65
Prom1O54990 Otx2os1-206ENSMUST00000228153 787 ntBASIC19.1■□□□□ 0.65
Prom1O54990 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Prom1O54990 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Prom1O54990 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Prom1O54990 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC19.1■□□□□ 0.65
Prom1O54990 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Prom1O54990 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Prom1O54990 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Prom1O54990 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Prom1O54990 AC154855.1-201ENSMUST00000227353 1458 ntBASIC19.09■□□□□ 0.65
Prom1O54990 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Prom1O54990 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Prom1O54990 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Prom1O54990 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Prom1O54990 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Prom1O54990 Gm43272-201ENSMUST00000200599 1584 ntBASIC19.09■□□□□ 0.65
Prom1O54990 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Prom1O54990 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.08■□□□□ 0.65
Prom1O54990 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Prom1O54990 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Prom1O54990 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Prom1O54990 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
Prom1O54990 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Prom1O54990 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Prom1O54990 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Prom1O54990 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Prom1O54990 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC19.08■□□□□ 0.64
Prom1O54990 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Prom1O54990 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Prom1O54990 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
Prom1O54990 Mir3081-201ENSMUST00000175305 84 ntBASIC19.08■□□□□ 0.64
Prom1O54990 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Prom1O54990 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Prom1O54990 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Prom1O54990 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Prom1O54990 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Prom1O54990 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Prom1O54990 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Prom1O54990 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Prom1O54990 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Prom1O54990 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Prom1O54990 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Prom1O54990 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Prom1O54990 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Prom1O54990 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC19.07■□□□□ 0.64
Prom1O54990 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Prom1O54990 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC19.07■□□□□ 0.64
Prom1O54990 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC19.07■□□□□ 0.64
Prom1O54990 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Prom1O54990 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Prom1O54990 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Prom1O54990 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Prom1O54990 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Prom1O54990 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Prom1O54990 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Prom1O54990 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Prom1O54990 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Prom1O54990 Olfr129-201ENSMUST00000122318 993 ntBASIC19.06■□□□□ 0.64
Prom1O54990 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Prom1O54990 Gm27742-201ENSMUST00000184667 60 ntBASIC19.06■□□□□ 0.64
Prom1O54990 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC19.06■□□□□ 0.64
Prom1O54990 Umpk-ps-201ENSMUST00000211897 827 ntBASIC19.06■□□□□ 0.64
Prom1O54990 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Prom1O54990 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Prom1O54990 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Prom1O54990 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Prom1O54990 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Prom1O54990 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Prom1O54990 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Prom1O54990 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
Prom1O54990 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Prom1O54990 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Prom1O54990 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.05■□□□□ 0.64
Prom1O54990 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Prom1O54990 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Prom1O54990 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Prom1O54990 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Prom1O54990 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Prom1O54990 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Prom1O54990 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC19.05■□□□□ 0.64
Prom1O54990 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Prom1O54990 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Prom1O54990 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Prom1O54990 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Prom1O54990 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Prom1O54990 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms