Protein–RNA interactions for Protein: O54943

Per2, Period circadian protein homolog 2, mousemouse

Predictions only

Length 1,257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per2O54943 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.06■□□□□ 0.48
Per2O54943 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Per2O54943 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Per2O54943 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Per2O54943 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Per2O54943 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.06■□□□□ 0.48
Per2O54943 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Per2O54943 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.06■□□□□ 0.48
Per2O54943 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Per2O54943 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.06■□□□□ 0.48
Per2O54943 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.06■□□□□ 0.48
Per2O54943 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Per2O54943 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Per2O54943 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Per2O54943 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Per2O54943 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Per2O54943 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
Per2O54943 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Per2O54943 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Per2O54943 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Per2O54943 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Per2O54943 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Per2O54943 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Per2O54943 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Per2O54943 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Per2O54943 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.05■□□□□ 0.48
Per2O54943 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Per2O54943 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Per2O54943 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Per2O54943 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Per2O54943 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.05■□□□□ 0.48
Per2O54943 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Per2O54943 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Per2O54943 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Per2O54943 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Per2O54943 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Per2O54943 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Per2O54943 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Per2O54943 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
Per2O54943 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.05■□□□□ 0.48
Per2O54943 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Per2O54943 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Per2O54943 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Per2O54943 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Per2O54943 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Per2O54943 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.04■□□□□ 0.48
Per2O54943 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Per2O54943 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Per2O54943 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Per2O54943 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Per2O54943 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Per2O54943 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Per2O54943 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Per2O54943 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Per2O54943 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Per2O54943 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Per2O54943 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Per2O54943 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Per2O54943 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Per2O54943 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Per2O54943 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Per2O54943 Gm37292-201ENSMUST00000192062 758 ntBASIC18.03■□□□□ 0.48
Per2O54943 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.03■□□□□ 0.48
Per2O54943 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Per2O54943 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Per2O54943 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Per2O54943 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
Per2O54943 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Per2O54943 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.03■□□□□ 0.48
Per2O54943 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Per2O54943 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Per2O54943 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Per2O54943 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Per2O54943 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Per2O54943 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Per2O54943 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Per2O54943 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Per2O54943 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Per2O54943 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Per2O54943 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Per2O54943 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Per2O54943 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.02■□□□□ 0.48
Per2O54943 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.02■□□□□ 0.48
Per2O54943 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Per2O54943 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Per2O54943 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Per2O54943 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.02■□□□□ 0.48
Per2O54943 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Per2O54943 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Per2O54943 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Per2O54943 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Per2O54943 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Per2O54943 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Per2O54943 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Per2O54943 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Per2O54943 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.01■□□□□ 0.47
Per2O54943 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Per2O54943 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Per2O54943 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.01■□□□□ 0.47
Per2O54943 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms