Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.99■□□□□ 0.47
Cldn5O54942 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cldn5O54942 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.98■□□□□ 0.47
Cldn5O54942 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cldn5O54942 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cldn5O54942 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
Cldn5O54942 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cldn5O54942 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.98■□□□□ 0.47
Cldn5O54942 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cldn5O54942 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cldn5O54942 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cldn5O54942 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cldn5O54942 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.98■□□□□ 0.47
Cldn5O54942 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cldn5O54942 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cldn5O54942 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cldn5O54942 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cldn5O54942 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cldn5O54942 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cldn5O54942 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cldn5O54942 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Cldn5O54942 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cldn5O54942 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.97■□□□□ 0.47
Cldn5O54942 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cldn5O54942 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.97■□□□□ 0.47
Cldn5O54942 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cldn5O54942 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cldn5O54942 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cldn5O54942 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cldn5O54942 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cldn5O54942 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.97■□□□□ 0.47
Cldn5O54942 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cldn5O54942 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cldn5O54942 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cldn5O54942 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.96■□□□□ 0.47
Cldn5O54942 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cldn5O54942 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cldn5O54942 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cldn5O54942 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cldn5O54942 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.96■□□□□ 0.47
Cldn5O54942 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Cldn5O54942 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
Cldn5O54942 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cldn5O54942 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cldn5O54942 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.96■□□□□ 0.47
Cldn5O54942 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.96■□□□□ 0.47
Cldn5O54942 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.96■□□□□ 0.47
Cldn5O54942 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.96■□□□□ 0.47
Cldn5O54942 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Cldn5O54942 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cldn5O54942 Gm7370-201ENSMUST00000219471 767 ntBASIC17.96■□□□□ 0.47
Cldn5O54942 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Cldn5O54942 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cldn5O54942 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Cldn5O54942 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.96■□□□□ 0.47
Cldn5O54942 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cldn5O54942 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.96■□□□□ 0.46
Cldn5O54942 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.95■□□□□ 0.46
Cldn5O54942 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
Cldn5O54942 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cldn5O54942 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.95■□□□□ 0.46
Cldn5O54942 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.95■□□□□ 0.46
Cldn5O54942 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cldn5O54942 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cldn5O54942 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cldn5O54942 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.95■□□□□ 0.46
Cldn5O54942 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cldn5O54942 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Cldn5O54942 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cldn5O54942 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cldn5O54942 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.94■□□□□ 0.46
Cldn5O54942 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Cldn5O54942 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Cldn5O54942 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cldn5O54942 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Cldn5O54942 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Cldn5O54942 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.94■□□□□ 0.46
Cldn5O54942 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cldn5O54942 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cldn5O54942 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Cldn5O54942 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cldn5O54942 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cldn5O54942 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
Cldn5O54942 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Cldn5O54942 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.93■□□□□ 0.46
Cldn5O54942 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cldn5O54942 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cldn5O54942 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cldn5O54942 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cldn5O54942 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cldn5O54942 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cldn5O54942 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Cldn5O54942 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Cldn5O54942 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cldn5O54942 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cldn5O54942 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cldn5O54942 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.92■□□□□ 0.46
Cldn5O54942 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cldn5O54942 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cldn5O54942 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms