Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Limk2O54785 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Limk2O54785 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Limk2O54785 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
Limk2O54785 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Limk2O54785 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Limk2O54785 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Limk2O54785 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Limk2O54785 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Limk2O54785 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Limk2O54785 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.58■□□□□ 0.4
Limk2O54785 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Limk2O54785 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Limk2O54785 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.58■□□□□ 0.4
Limk2O54785 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.58■□□□□ 0.4
Limk2O54785 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.58■□□□□ 0.4
Limk2O54785 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Limk2O54785 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.58■□□□□ 0.4
Limk2O54785 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Limk2O54785 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.58■□□□□ 0.4
Limk2O54785 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Limk2O54785 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Limk2O54785 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Limk2O54785 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Limk2O54785 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Limk2O54785 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Limk2O54785 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Limk2O54785 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.57■□□□□ 0.4
Limk2O54785 Gm11539-201ENSMUST00000119837 557 ntBASIC17.57■□□□□ 0.4
Limk2O54785 Gm13436-201ENSMUST00000120418 567 ntBASIC17.57■□□□□ 0.4
Limk2O54785 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Limk2O54785 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Limk2O54785 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Limk2O54785 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Limk2O54785 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Limk2O54785 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Limk2O54785 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.57■□□□□ 0.4
Limk2O54785 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Limk2O54785 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.56■□□□□ 0.4
Limk2O54785 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Limk2O54785 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Limk2O54785 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.56■□□□□ 0.4
Limk2O54785 Gm24841-201ENSMUST00000158676 357 ntBASIC17.56■□□□□ 0.4
Limk2O54785 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.56■□□□□ 0.4
Limk2O54785 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.56■□□□□ 0.4
Limk2O54785 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Limk2O54785 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Limk2O54785 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Limk2O54785 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Limk2O54785 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Limk2O54785 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Limk2O54785 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Limk2O54785 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Limk2O54785 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.55■□□□□ 0.4
Limk2O54785 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Limk2O54785 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Limk2O54785 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.55■□□□□ 0.4
Limk2O54785 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Limk2O54785 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Limk2O54785 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Limk2O54785 Gm3375-201ENSMUST00000203929 796 ntBASIC17.55■□□□□ 0.4
Limk2O54785 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.55■□□□□ 0.4
Limk2O54785 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Limk2O54785 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Limk2O54785 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Limk2O54785 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Limk2O54785 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Limk2O54785 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.55■□□□□ 0.4
Limk2O54785 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Limk2O54785 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Limk2O54785 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Limk2O54785 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Limk2O54785 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Limk2O54785 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Limk2O54785 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Limk2O54785 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
Limk2O54785 Gm21362-201ENSMUST00000194272 928 ntBASIC17.54■□□□□ 0.4
Limk2O54785 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.54■□□□□ 0.4
Limk2O54785 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Limk2O54785 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Limk2O54785 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Limk2O54785 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Limk2O54785 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Limk2O54785 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Limk2O54785 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.54■□□□□ 0.4
Limk2O54785 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Limk2O54785 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Limk2O54785 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.53■□□□□ 0.4
Limk2O54785 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Limk2O54785 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Limk2O54785 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Limk2O54785 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Limk2O54785 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC17.53■□□□□ 0.4
Limk2O54785 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Limk2O54785 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
Limk2O54785 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.53■□□□□ 0.4
Limk2O54785 Gm7889-201ENSMUST00000185591 958 ntBASIC17.53■□□□□ 0.4
Limk2O54785 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.53■□□□□ 0.4
Limk2O54785 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.53■□□□□ 0.4
Limk2O54785 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms