Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sdc4O35988 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sdc4O35988 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sdc4O35988 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Sdc4O35988 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Sdc4O35988 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Sdc4O35988 Mir8112-201ENSMUST00000184382 131 ntBASIC17.85■□□□□ 0.45
Sdc4O35988 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sdc4O35988 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.85■□□□□ 0.45
Sdc4O35988 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sdc4O35988 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Sdc4O35988 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sdc4O35988 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sdc4O35988 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sdc4O35988 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Sdc4O35988 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sdc4O35988 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sdc4O35988 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sdc4O35988 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Sdc4O35988 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sdc4O35988 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.84■□□□□ 0.45
Sdc4O35988 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.84■□□□□ 0.45
Sdc4O35988 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.84■□□□□ 0.45
Sdc4O35988 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Sdc4O35988 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sdc4O35988 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sdc4O35988 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sdc4O35988 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Sdc4O35988 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Sdc4O35988 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.84■□□□□ 0.45
Sdc4O35988 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.84■□□□□ 0.45
Sdc4O35988 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sdc4O35988 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Sdc4O35988 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Sdc4O35988 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Sdc4O35988 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.83■□□□□ 0.45
Sdc4O35988 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Sdc4O35988 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Sdc4O35988 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Sdc4O35988 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Sdc4O35988 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Sdc4O35988 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Sdc4O35988 Gm17661-201ENSMUST00000170317 270 ntBASIC17.83■□□□□ 0.44
Sdc4O35988 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.83■□□□□ 0.44
Sdc4O35988 Gm18032-201ENSMUST00000222541 538 ntBASIC17.83■□□□□ 0.44
Sdc4O35988 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sdc4O35988 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.83■□□□□ 0.44
Sdc4O35988 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Sdc4O35988 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Sdc4O35988 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sdc4O35988 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sdc4O35988 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sdc4O35988 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sdc4O35988 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Sdc4O35988 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sdc4O35988 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Sdc4O35988 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sdc4O35988 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Sdc4O35988 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sdc4O35988 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Sdc4O35988 Gm6659-201ENSMUST00000174752 547 ntBASIC17.82■□□□□ 0.44
Sdc4O35988 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Sdc4O35988 Gm18101-201ENSMUST00000215769 548 ntBASIC17.82■□□□□ 0.44
Sdc4O35988 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sdc4O35988 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sdc4O35988 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sdc4O35988 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sdc4O35988 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sdc4O35988 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Sdc4O35988 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.82■□□□□ 0.44
Sdc4O35988 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sdc4O35988 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sdc4O35988 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Sdc4O35988 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sdc4O35988 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sdc4O35988 Rarb-207ENSMUST00000225921 2756 ntBASIC17.81■□□□□ 0.44
Sdc4O35988 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sdc4O35988 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sdc4O35988 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sdc4O35988 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sdc4O35988 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Sdc4O35988 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sdc4O35988 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sdc4O35988 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sdc4O35988 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Sdc4O35988 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
Sdc4O35988 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.81■□□□□ 0.44
Sdc4O35988 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.81■□□□□ 0.44
Sdc4O35988 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Sdc4O35988 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.81■□□□□ 0.44
Sdc4O35988 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Sdc4O35988 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sdc4O35988 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Sdc4O35988 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sdc4O35988 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Sdc4O35988 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
Sdc4O35988 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Sdc4O35988 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sdc4O35988 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Sdc4O35988 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms